Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3712 |
Symbol | |
ID | 7973945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3911476 |
End bp | 3912042 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644794296 |
Product | hypothetical protein |
Protein accession | YP_002945594 |
Protein GI | 239816684 |
COG category | [R] General function prediction only |
COG ID | [COG2068] Uncharacterized MobA-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.785047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAA AGGCGAATTC CCCGTGCGTG ATCGTGCTGG CCTCGGGCCG CGGCGAGCGC TTCATCGCGG CCGGCGGCAC GGGCCCCAAG CTGCAGGCGC CGCTGGCGGG CAAGCCGCTG CTCGAACGCA CGCTGGACGC GGTGCGCGCG AGCGGCCTGC CGTGGCGGCT CGAAGACGCG GGCCACCCGG GCATGGGCGA CTCGATTGCC GCCGCGGTGC GCGCCACGCC GGATGCCGCC GGCTGGCTCA TTCTTCCGGG CGACCTGCCG CTGGTGCGCC CGGAGACGCT GCGGGCCGTG GCCGGCGCGC TGGCCGGCCG GGCGCGCGCG GTGCAGCCGC AATACAGGGG CGAGCGCGGC CATCCGGTCG GCTTCTCGGC CGGCTGCGGC GCGCAGCTTG CGGCGCTCCG GGGACCGCTG GGCGCATCCT CCATCCTGAA GGCGATGCGC GCCATCGATG CAGTGGCCGA GCTCGCGGTG GACGACGTCG GCATCGTGAC CGACATCGAC ACGCCCGAGG CGCTGGCCGC CGCCGAGGCG CTCTGGCTGG CGCGCCTGCC GGGCTAG
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Protein sequence | MATKANSPCV IVLASGRGER FIAAGGTGPK LQAPLAGKPL LERTLDAVRA SGLPWRLEDA GHPGMGDSIA AAVRATPDAA GWLILPGDLP LVRPETLRAV AGALAGRARA VQPQYRGERG HPVGFSAGCG AQLAALRGPL GASSILKAMR AIDAVAELAV DDVGIVTDID TPEALAAAEA LWLARLPG
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