Gene Vapar_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3712 
Symbol 
ID7973945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3911476 
End bp3912042 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content76% 
IMG OID644794296 
Producthypothetical protein 
Protein accessionYP_002945594 
Protein GI239816684 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.785047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAA AGGCGAATTC CCCGTGCGTG ATCGTGCTGG CCTCGGGCCG CGGCGAGCGC 
TTCATCGCGG CCGGCGGCAC GGGCCCCAAG CTGCAGGCGC CGCTGGCGGG CAAGCCGCTG
CTCGAACGCA CGCTGGACGC GGTGCGCGCG AGCGGCCTGC CGTGGCGGCT CGAAGACGCG
GGCCACCCGG GCATGGGCGA CTCGATTGCC GCCGCGGTGC GCGCCACGCC GGATGCCGCC
GGCTGGCTCA TTCTTCCGGG CGACCTGCCG CTGGTGCGCC CGGAGACGCT GCGGGCCGTG
GCCGGCGCGC TGGCCGGCCG GGCGCGCGCG GTGCAGCCGC AATACAGGGG CGAGCGCGGC
CATCCGGTCG GCTTCTCGGC CGGCTGCGGC GCGCAGCTTG CGGCGCTCCG GGGACCGCTG
GGCGCATCCT CCATCCTGAA GGCGATGCGC GCCATCGATG CAGTGGCCGA GCTCGCGGTG
GACGACGTCG GCATCGTGAC CGACATCGAC ACGCCCGAGG CGCTGGCCGC CGCCGAGGCG
CTCTGGCTGG CGCGCCTGCC GGGCTAG
 
Protein sequence
MATKANSPCV IVLASGRGER FIAAGGTGPK LQAPLAGKPL LERTLDAVRA SGLPWRLEDA 
GHPGMGDSIA AAVRATPDAA GWLILPGDLP LVRPETLRAV AGALAGRARA VQPQYRGERG
HPVGFSAGCG AQLAALRGPL GASSILKAMR AIDAVAELAV DDVGIVTDID TPEALAAAEA
LWLARLPG