| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3711 |
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| Symbol | |
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| ID | 7973944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3910929 |
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| End bp | 3911471 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794295 |
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| Product | superoxide dismutase copper/zinc binding |
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| Protein accession | YP_002945593 |
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| Protein GI | 239816683 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2032] Cu/Zn superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATC GCCTTCTCGC CGCCACCGGC ACCGCCCTTC TCGCCAGCGC CCTGCTTTCG
GCCTGCGGCA GCATGATGGG CGGCAAGCCG AGCGCGGCTG CCGAACTGAT GCCCACCGCC
GCGATCTCGC CCAACCCCAC GCGGGGCACG GTGATCTTCA CCGCGCTGGA CCATGGCGTG
CGCGTGGCCG GCGAGGTGCG CGGCCTGGCA CCGGGCAGCG AGCACGGTTT CCACATCCAC
GAAAAGGGCG ACTGCGGCGA CAACGGCAAC GCCTCGGGCG GCCACTTCAA CCCGGCCGGC
GGCACGCACG GCAAGTTCAG CGCGCCGGGC AGCCATGCCG GCGAACTGCC GAGCCTGGTG
GCCGACGGCA GCGGCGTGGC CCGCTTCAGC GTCGACGTCC ACTCGATCTC GCTGGCCGAA
GGCACTGCCA ACAACGTGGT GGGCCGCGCG CTCGTGGTGC ACCGCGACCG CGACGACTTC
ACCACCCAGC CGGCCGGCAA CTCCGGCCCG CGCACCGCCT GCGCGGTGAT CGCGCGGCGC
TGA
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| Protein sequence | MNHRLLAATG TALLASALLS ACGSMMGGKP SAAAELMPTA AISPNPTRGT VIFTALDHGV
RVAGEVRGLA PGSEHGFHIH EKGDCGDNGN ASGGHFNPAG GTHGKFSAPG SHAGELPSLV
ADGSGVARFS VDVHSISLAE GTANNVVGRA LVVHRDRDDF TTQPAGNSGP RTACAVIARR
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