| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3703 |
|---|
| Symbol | |
|---|
| ID | 7973936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 3903194 |
|---|
| End bp | 3903634 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644794287 |
|---|
| Product | lactoylglutathione lyase |
|---|
| Protein accession | YP_002945585 |
|---|
| Protein GI | 239816675 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | [TIGR00068] lactoylglutathione lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTCC TCCACACCAT GCTGCGCGTC GGCAACCTCC AGCGTTCGAT CGACTTCTAC
ACCCAGGTGC TTGGCATGAG CCTGCTGCGC ACCTCGGAGA ACCCCGAGTA CAAATACAGC
CTCGCCTTCG TCGGCTACGG CGGCGGCAAC CCCGGGCAGG CCGAGATCGA GCTCACCTAC
AACTGGGGCA CCGAAAGCTA CGAACTCGGC ACGGCCTACG GCCACATCGC GCTCGGCGTG
CCCGACGCCT ACGCGGCCTG CGAAAAGATC AAGGCCGCCG GCGGCAACGT CACGCGCGAA
GCCGGGCCCG TGAAGGGCGG CACCACCGTG ATCGCCTTCG TGACCGATCC CGACGGCTAC
AAGATCGAGC TCATACAGGA CAAGGCAAAG GCTTCCGGCG ACGGCAGCCC CGCCGGTTCC
GACGCCCTGC GCGCGTCCTA G
|
|---|
| Protein sequence | MRLLHTMLRV GNLQRSIDFY TQVLGMSLLR TSENPEYKYS LAFVGYGGGN PGQAEIELTY
NWGTESYELG TAYGHIALGV PDAYAACEKI KAAGGNVTRE AGPVKGGTTV IAFVTDPDGY
KIELIQDKAK ASGDGSPAGS DALRAS
|
|---|
| |