Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3691 |
Symbol | |
ID | 7973924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3892244 |
End bp | 3892885 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644794275 |
Product | KDPG and KHG aldolase |
Protein accession | YP_002945573 |
Protein GI | 239816663 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAC CGCAACAAAA ATTCGAAACC GCGATGCGCG CGCTGCCGCT GGTCGCCATC CTGCGCGGGC TCACGCCGGC CGAGGCTGCC GACGTGGGCG ATGCCATCGT CGAATCGGGC TTCCGGCTGC TCGAGGTGCC GCTCAATTCG CCCAAGCCCT ACGCCAGCAT CACGCTGATG CGCACGCGCT TTCCGCAGGC CCTGGTGGGC GCCGGCACGG TGCTCGACGT GCAGCAGGTG CGCTATGTGC ATGCGGCCGG CGGCGAGCTG GTGGTGTCGC CCAACTTCAA TGCCGGGGTG ATCGCCGAGG CCGTGCGGCT CGGCATGGTC TGCCTGCCCG GCGTGCTGAC GCCGACCGAA GCCTTCGGCG CGCTGGCCGC GGGCGCGACC GGGCTCAAGC TGTTTCCGGC CGAGCTCGCA TCGCCCGCGG TGGTGAAGGC CCTGCTCGCG GTGCTGCCCC AGGGCACGCC GCTGATGCCC GTGGGCGGCA TCACGCCCGC CAACATGGCC GAATGGCGTG CGGCCGGCGC GGCCGGCTTC GGCATCGGCT CCGCGCTCTA CAAGCCGGGC AAGCAGGCTT CGGCCGTGCG CGCCGATGCG CAGAAATTCG TCGCGGCCTT CACCGGCGCG GCCGCCATCT GA
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Protein sequence | MTTPQQKFET AMRALPLVAI LRGLTPAEAA DVGDAIVESG FRLLEVPLNS PKPYASITLM RTRFPQALVG AGTVLDVQQV RYVHAAGGEL VVSPNFNAGV IAEAVRLGMV CLPGVLTPTE AFGALAAGAT GLKLFPAELA SPAVVKALLA VLPQGTPLMP VGGITPANMA EWRAAGAAGF GIGSALYKPG KQASAVRADA QKFVAAFTGA AAI
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