Gene Vapar_3691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3691 
Symbol 
ID7973924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3892244 
End bp3892885 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID644794275 
ProductKDPG and KHG aldolase 
Protein accessionYP_002945573 
Protein GI239816663 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAC CGCAACAAAA ATTCGAAACC GCGATGCGCG CGCTGCCGCT GGTCGCCATC 
CTGCGCGGGC TCACGCCGGC CGAGGCTGCC GACGTGGGCG ATGCCATCGT CGAATCGGGC
TTCCGGCTGC TCGAGGTGCC GCTCAATTCG CCCAAGCCCT ACGCCAGCAT CACGCTGATG
CGCACGCGCT TTCCGCAGGC CCTGGTGGGC GCCGGCACGG TGCTCGACGT GCAGCAGGTG
CGCTATGTGC ATGCGGCCGG CGGCGAGCTG GTGGTGTCGC CCAACTTCAA TGCCGGGGTG
ATCGCCGAGG CCGTGCGGCT CGGCATGGTC TGCCTGCCCG GCGTGCTGAC GCCGACCGAA
GCCTTCGGCG CGCTGGCCGC GGGCGCGACC GGGCTCAAGC TGTTTCCGGC CGAGCTCGCA
TCGCCCGCGG TGGTGAAGGC CCTGCTCGCG GTGCTGCCCC AGGGCACGCC GCTGATGCCC
GTGGGCGGCA TCACGCCCGC CAACATGGCC GAATGGCGTG CGGCCGGCGC GGCCGGCTTC
GGCATCGGCT CCGCGCTCTA CAAGCCGGGC AAGCAGGCTT CGGCCGTGCG CGCCGATGCG
CAGAAATTCG TCGCGGCCTT CACCGGCGCG GCCGCCATCT GA
 
Protein sequence
MTTPQQKFET AMRALPLVAI LRGLTPAEAA DVGDAIVESG FRLLEVPLNS PKPYASITLM 
RTRFPQALVG AGTVLDVQQV RYVHAAGGEL VVSPNFNAGV IAEAVRLGMV CLPGVLTPTE
AFGALAAGAT GLKLFPAELA SPAVVKALLA VLPQGTPLMP VGGITPANMA EWRAAGAAGF
GIGSALYKPG KQASAVRADA QKFVAAFTGA AAI