| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3686 |
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| Symbol | |
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| ID | 7973919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3886303 |
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| End bp | 3887178 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794270 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945568 |
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| Protein GI | 239816658 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCCA CTGCCACCGC CGCGCCATCC CTGGCGCCTG TTGTCAATCT CGGGGCGCGG
CACGCGCGCT GGCAGTTCTG GGGCGCGGTC ATGGTCGTGC CCTACCTGCT GGTGTTCGTG
GTGTTCGTGC TCTATCCGGT GGGGTACGGG CTGTGGCTCG CGCGCCATCC GCAAAGCTAC
GTCAAGCTGG TCGAAGACCC GATCTTCTTC CGCTCGGTGA TCAACACGGC CATCTTCCTG
GTCGTGGCGA TCAACATCAA GATGCTCGTG GCCCTGGTGC TTTCGGGCTT CTTCGTGACA
TCGCGCTGGT GGATCAAGAT CGTCTCGGCG ATCTTCATCC TGCCATGGGC GATGCCCTCC
ATTCCCACCA TCCTGTCGGT CCGCTTCATG CTCAACCCCG AGTGGGGCGT GATCAACAGC
ACCATCTTCC GCCTCACCGG CGCGGATGGT CCCAACTGGC TCAACGATCC TTCGCTGGCA
CTGGCCCTGG CGATGGTGGT GCACGTATGG AAGTCGCTGC CGTTCTGGAC GCTGATCCTG
GTGGCAGGGC GGCTGGCCAT TCCTGCCGAA CAGTATGAAG CCGCTTCGGT CGACGGCGCC
TCGACGTGGC AGAAGTTCCG CTTCGTGAGC TGGCCCGCGC TGAAGACGCT CTACGTCACG
TCCCTCATTC TTTCGATGAT CTGGACGCTG GGCGACTTCA ACAGCGTCTA CCTGCTGACC
GGCGGCGGAC CTGCCGACCT GACGCACGTG CTCGCAACCT TGGGCATCCG CTATCTGCGG
CTGGACCAGG TCGACCTGTC GATGGCATCG ATCGTGGTGG CGCTGCCGCT CGTCCTGCCA
CTCGTCTACT TCATGATGAA AAGGCTCTCG AAATGA
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| Protein sequence | MSSTATAAPS LAPVVNLGAR HARWQFWGAV MVVPYLLVFV VFVLYPVGYG LWLARHPQSY
VKLVEDPIFF RSVINTAIFL VVAINIKMLV ALVLSGFFVT SRWWIKIVSA IFILPWAMPS
IPTILSVRFM LNPEWGVINS TIFRLTGADG PNWLNDPSLA LALAMVVHVW KSLPFWTLIL
VAGRLAIPAE QYEAASVDGA STWQKFRFVS WPALKTLYVT SLILSMIWTL GDFNSVYLLT
GGGPADLTHV LATLGIRYLR LDQVDLSMAS IVVALPLVLP LVYFMMKRLS K
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