| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3685 |
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| Symbol | |
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| ID | 7973918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3885369 |
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| End bp | 3886220 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794269 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945567 |
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| Protein GI | 239816657 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCT GGACCCCCAA GGCCATAGCG ACCGAGGCCA AGCTGCTGCT GATCGGCATT
CCGGTGCTGC TCTGGACGCT GATTCCGGTC TACCACATGG TGCTGTTCGC GATCTCCTCC
AAGGACTCCG CGACCTCGGG CCACCTGTGG CCCAAGAACC CGACGCTGGA CAACTTCCGC
ATCGTGTTCC AGCAGAAGCA CTTCTACCTC GACCACTTCT GGCTGCAGCT GGGGAACTCG
CTGCTGATCG CACTGTCGGT CGGGGCGCTC ACGCTGTTCG TCGCAACCAC GGCCGCGTTC
GCGATCAGCC GGCTGCGCGT GCGCGGCGGG CGCACGGTGA TGAACCTGGC GCTCTTCACC
TACTTCATTC CCGCGGCCTT TCTTGCCGTG CCCATGTACA AGACCATGGG CAACTACGGC
CTGCTCAACA GCCAGTGGGC GCTGATCCTT GCCATGGTGA CCATCGCCTC GCCGTACTGC
ATCTGGGTGC TCAAGCAGGC CTCCGACAAG CTGCCCTACG AGCTCGACGA GGCCGCGCGC
ATGGATGGTG CCTCGCCGCT GCAGCTGTTC CGCCTGGTGT ACCTGCCGCT GATGGTGCCG
TCGCTGGTGG CGGTGGGCAC CTATTCGCTG CTGCTGGCAT GGAACGAATA CCTCTACGCC
TTCCTGCTGC TGTCGAACGA CAGGAGCGTG ACCTTGGCGG TGGCGCTCGG CAACTTCCTC
TCGGCCGACG ATTCGCCGTG GGAGCTGCTG ATGGCCACCG GCCTCATCTA TGCATTGCCG
CCCGCGGCGA TCTACTACGC CTTCAAGCGC TACATGGTGG GCGGCCTCAC TGCAGGCGCC
GTCAAGAGCT GA
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| Protein sequence | MKRWTPKAIA TEAKLLLIGI PVLLWTLIPV YHMVLFAISS KDSATSGHLW PKNPTLDNFR
IVFQQKHFYL DHFWLQLGNS LLIALSVGAL TLFVATTAAF AISRLRVRGG RTVMNLALFT
YFIPAAFLAV PMYKTMGNYG LLNSQWALIL AMVTIASPYC IWVLKQASDK LPYELDEAAR
MDGASPLQLF RLVYLPLMVP SLVAVGTYSL LLAWNEYLYA FLLLSNDRSV TLAVALGNFL
SADDSPWELL MATGLIYALP PAAIYYAFKR YMVGGLTAGA VKS
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