| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3684 |
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| Symbol | |
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| ID | 7973917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3884282 |
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| End bp | 3885349 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794268 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945566 |
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| Protein GI | 239816656 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCCG TATCCTTTCG CAATATCCAG AAATCCTTCG GCAAGGTCCA GATCATCCAG
GGCCTGAGCT TCGACATCAC CGATGGCGAG TTCGTGGTGC TGGTCGGGCC TTCGGGCTGC
GGCAAGTCCA CCTTGCTGCG CATGCTCGCG GGCCTGGAGG ACATCAGCGG CGGCGAGATC
ATGATCGACA GCCGCGTGGT CAACGACCTC GAGTCCAAGG ACCGCGACAT CGCCATGGTG
TTCCAGAGCT ACGCGCTCTA TCCGCACATG ACGGTCGGCG AGAACATGGG CTTCAGCCTG
CGGCTGCGCA ATGCCGAGAA GTCGGTGACC GACGAGCGCG TGGCGCGCGC CGCGAAGATC
CTCAACCTCG ATGCACTGCT CGGGCGCTAT CCGCGCGAGC TGTCGGGCGG CCAGCGCCAG
CGCGTGGCCA TGGGGCGCGC CATCGTGCGC GACCCCAAGG TGTTCCTGTT CGACGAGCCG
CTCTCCAACC TCGACGCCAA GCTGCGCGTG GCGATGCGCG CCGAGATCAA GGCGCTGCAC
CAGCGCCTGA AGACCACCAC CGTCTATGTG ACGCACGACC AGATCGAGGC CATGACCATG
GCCGACCGCA TCGTGGTGAT GCACGACGGC ATCGTCGAGC AGATCGGCAC GCCGCTCGAC
CTGTACGACC GCCCCGACAA CCTGTTCGTC GCGCAGTTCA TCGGCTCGCC GTCGATGAAC
GTGATCGAGG GCACGGTGCG GCGCTCGGGC GGCGAATGCC ATGTCGAGGC ACATGGCGCG
CGTTGGCCCG TGCCGCCGGG CACCTCGGCG CCCGATGGCC AGCCGGTGCA CTACGGCATC
CGCCCCGGCG ACATCACGCT GGGCGGCGGC AGCGGCGTCG ATGCGCAGGT GATCGTGGTC
GAGCCCACGG GCGCCGAGAC CGAACTGCTG GTGCAGGTCG GCGAAGCGAA GCTGGTGCTC
GCGGTGCATG GCCGCGTCGA CGCGCAGCCC GACCAGACCG TGGGCCTGGC GATCGATGCC
AACCGCGTGC ACCTGTTCGA CCGCCAGAGC GGCCGGCGCA TGCCCTGA
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| Protein sequence | MASVSFRNIQ KSFGKVQIIQ GLSFDITDGE FVVLVGPSGC GKSTLLRMLA GLEDISGGEI
MIDSRVVNDL ESKDRDIAMV FQSYALYPHM TVGENMGFSL RLRNAEKSVT DERVARAAKI
LNLDALLGRY PRELSGGQRQ RVAMGRAIVR DPKVFLFDEP LSNLDAKLRV AMRAEIKALH
QRLKTTTVYV THDQIEAMTM ADRIVVMHDG IVEQIGTPLD LYDRPDNLFV AQFIGSPSMN
VIEGTVRRSG GECHVEAHGA RWPVPPGTSA PDGQPVHYGI RPGDITLGGG SGVDAQVIVV
EPTGAETELL VQVGEAKLVL AVHGRVDAQP DQTVGLAIDA NRVHLFDRQS GRRMP
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