Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3671 |
Symbol | |
ID | 7973904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3871166 |
End bp | 3872131 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644794256 |
Product | protein of unknown function DUF72 |
Protein accession | YP_002945554 |
Protein GI | 239816644 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.639508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGGCA CGACGCGAAT CGGGATTTCT GGCTGGCGCT ATGCGCCATG GCGCGGCCGC TTCTATCCGA AGGGGCTCCC GCAGCGGCTC GAGCTCGACT TTGCCTCGCG CATGCTGCCC ACCATCGAGA TCAACGGCTC GTTCTATTCA CTGCAGCGCC CCGTGTCCTA CCAGGCATGG CACGACGCGA CACCCGAGGA TTTCGTGTTT GCGGTGAAGG GGCCGCGCTA CATCACCCAC AACCTGCGGC TCAAGGAACC GCGCGCCGCG CTGGCCAACT TCTTTGCCTC GGGCGTGTTT GCGCTGGGCG CCAAGCTCGG GCCCATCCTC TGGCAGCTGC CGCCGTCCTT CGCCTACGAC GCCGATCGCC TCGAGGAATT CCTGGCGCTG CTGCCCAGGG ACGGCCGCTC GGCCCTCAAG CTCGCGCGGC AGCACAACGA GAAGCTCAGG GACGAGCGTG CGTTGCTGAA GGCGCCCGCA AAGCTGCGCA TCCGGCATGC GGTGGAAGTG CGCCATGCGA GCTTTGCGAA CGCGGAGTTC ATCGCGATGC TGCGCCGCCA TGGCGTCGCG CTGGTGGTGG CCGACACGGC AGGGCGCTGG CCGCTGCTCG AAGACCTGTG CGCCGACTTC GTCTACATGC GGCTGCACGG CGACAAGGAG CTCTACGCGA GCGGCTACGA CGATGCCGCG CTCGACCGCT GGGCCGAGCG CATCGATGCC TGGCGCCATG GACGCCAGGT GAAGGATGCA AGACTGGCCG TGCCTTCGCG CCGGCTCTCC GGCCGCAAGG GGCGCGACGT GTTCTGCTAC TTCGACAACG ACGTCAAGGT GCACGCGCCC TACGACGCCG CGCACCTGGC GGCCCGGCTC GGCGTGGCCA CCGGACTGGG GGAGGACGAC AACTTCGAAG CGCCGCCGGA CATGGCCGTG CGAAAGCCGG CGCGTGCGCG CTCAGGCCGC AAGTAG
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Protein sequence | MQGTTRIGIS GWRYAPWRGR FYPKGLPQRL ELDFASRMLP TIEINGSFYS LQRPVSYQAW HDATPEDFVF AVKGPRYITH NLRLKEPRAA LANFFASGVF ALGAKLGPIL WQLPPSFAYD ADRLEEFLAL LPRDGRSALK LARQHNEKLR DERALLKAPA KLRIRHAVEV RHASFANAEF IAMLRRHGVA LVVADTAGRW PLLEDLCADF VYMRLHGDKE LYASGYDDAA LDRWAERIDA WRHGRQVKDA RLAVPSRRLS GRKGRDVFCY FDNDVKVHAP YDAAHLAARL GVATGLGEDD NFEAPPDMAV RKPARARSGR K
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