| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3668 |
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| Symbol | |
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| ID | 7973901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3869066 |
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| End bp | 3869722 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794253 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002945551 |
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| Protein GI | 239816641 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.165555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCG ACTTCGGTGC TGTTCTCGTC GATTGGCGGC TGCTCGCCAA GGGCATCGCG
TGGACGGTCG GCCTGACGGC CATCGCCACC GTCATCGGCA TGGCCGTGGG CGTGGCCTGC
GCCTGGGCGC GCGCCAGCGG GCCGGCGTGG CTGCGCTGGG TGGTCGGCAG CTATGTGGAG
CTGATCCGCA ACACGCCCTT CATCGTGCAG CTGTTCTTCA TCTTCTTCGG GCTGCCCGCG
GCGGGCGTCA AGCTCACGCC GGAGGTGGCA TCGATCATTG CGATGGTGAT GAACCTCGGG
GCCTATTCCA CCGAGATCAT CCGCGCCGGC ATCGAGGCCA CGCCCAAGGG ACAGATCGAG
GCGGCCGTGA GCCTGGCGCT CGACAAGGTG CAGGTGTTCA CCCGCGTGGT GCTGCCGCCG
GCGCTCAAGA AGGTGTGGCC CGCCATGGTG AGCCAGATCA TCATCGTGAT GCTGGGCTCG
GCCGTGTGCG GGCAGATCTC CACCGAGGAG CTGAGCTACG CGGCCAACCT CATCCAGAGC
CGCAACTTCC GCGCCTTCGA GGCCTTCATC GTCGCCACGC TGCTCTACCT GGCGCTGGCC
GTTGCGCTGC GCAGGCTGCT CAACTGGGCC GGGCCAAGAT TCTTCTTCGG CCGCTGA
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| Protein sequence | MEFDFGAVLV DWRLLAKGIA WTVGLTAIAT VIGMAVGVAC AWARASGPAW LRWVVGSYVE
LIRNTPFIVQ LFFIFFGLPA AGVKLTPEVA SIIAMVMNLG AYSTEIIRAG IEATPKGQIE
AAVSLALDKV QVFTRVVLPP ALKKVWPAMV SQIIIVMLGS AVCGQISTEE LSYAANLIQS
RNFRAFEAFI VATLLYLALA VALRRLLNWA GPRFFFGR
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