| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3667 |
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| Symbol | |
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| ID | 7973900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3868230 |
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| End bp | 3869030 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794252 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002945550 |
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| Protein GI | 239816640 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.200232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCT CTTCGTCCAA ACGCCATCTC TCGCTCGCGC TTGCATCCGT TGCCATGCTG
GCCGCCGCCG GCGGTGCACA GGCCCAGAAC GCGCTGGACA ACGTGCTGAA GGCCAAGACC
ATCAAGATCG CCGTGCCGAC CGACTATCCG CCCTACGGCT CGGTCGACAG GAACATGAAG
CCCCAGGGCC TGGACGTGGA AATGGCCGAG CTGATCGCTG CCAAGCTCGG CGTGAAGGTC
GAGCTGGTGC CCGTGACCAG CGCCAACCGC ATTCCCTACC TGCAGACGCG CAAGGCCGAC
CTCGTGATCT CCACGCTCGG CAAGAACCCC GAGCGCGAGA AGGTGATCGA CTTCTCCGCC
GCCTACGCGC CCTTCTTCCA GGCCGTGTAT GCCGCCAAGA GCATGAAGCT CACGAGCTTT
GCCGACATGG CCGGCAAGAC CGTTGCCGTG ACGCGCGGCG CGATGGAAGA CCAGGAACTG
AACAAGGTGG CGCCGCCGAA CGTCGACTAC CGCCGCTTCG AGGACAACAA CGCCACCATC
GCGGCCTTCG TGGCCGGCCA GACGCAGACC CTGGCCACCA GCGCGGCGGT TGCCGGCGAC
ATGCTCGCCA AGAACCCGAA GGTGAGCGCC GAGTTCAAGC TGCTGCTGAA GGACAGCCCC
TGCTTCGTCG GCGTGGCCAA GGGCGAAACT GCATTGAAGA CCAAGGTCAA CGAGATCATT
GCGGCCGCCA AGAAGGACGG CACGCTGGAC GCCATGTCGA AGAAGTGGCT CGGCAAGGCC
GCCGGCGACC TGCCGGTCTG A
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| Protein sequence | MTFSSSKRHL SLALASVAML AAAGGAQAQN ALDNVLKAKT IKIAVPTDYP PYGSVDRNMK
PQGLDVEMAE LIAAKLGVKV ELVPVTSANR IPYLQTRKAD LVISTLGKNP EREKVIDFSA
AYAPFFQAVY AAKSMKLTSF ADMAGKTVAV TRGAMEDQEL NKVAPPNVDY RRFEDNNATI
AAFVAGQTQT LATSAAVAGD MLAKNPKVSA EFKLLLKDSP CFVGVAKGET ALKTKVNEII
AAAKKDGTLD AMSKKWLGKA AGDLPV
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