| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3665 |
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| Symbol | |
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| ID | 7973898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3866059 |
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| End bp | 3867039 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794250 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945548 |
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| Protein GI | 239816638 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.155683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCC CAGCCCGCGC CGCCTTCCTG GCGGCCTTGT TTTCAATCGC GTCTTTCGGC
ATCGGCGGCG CCGCCATGGC CGCCTACCCC GACAAGCCGA TCAAGCTCGT CATCGGCTTT
CCGGCCGGCG GCCCGCTCGA CCAGCATGCG CGCCTCCTCA CCGACAAGCT GCAGGCGGTG
CTGGGCCAGC CGCTGATCGT CGACTACAAG CCCGGCGCGG GCGGTTCGGT GGGCGCCGAT
GCGGTCGCCA AGAGCCCGGC CGACGGCTAC ACGCTGATGC TGGCCAACAC CGGCGTGGCC
GTGATCAACG GCGCGCTCTA CAGCAAGCTG CCCTACAACA CGCAGCGCGA CTTCGTGCCC
ATCGCACGCA CCGCGATGCA GCCGCTGGCC CTGCTGGTCA CGCCCAAGCT GCCGGTGCAG
AACCTGCGGC AGTTCATCGA CTACGCCAAG GCACGGCCCG GCCAGGTCAA CTACGGCTCG
GCCGGCAACG GCGGCATCAG CCACCTGGTG CCGGAGATGT TCAAGACCGC CACCGGCATC
TTCATGGTGC ACATCCCGTA CCGCGGCAGC GCCCCGGCCT TCACGGACCT GATGGCCGGG
CAGGTGCAGT TCATGGCCGA GTCGATTCCG CAGGCGGCCA ACTACCACAA GCAGGGCAAG
GTGCGCGCAC TGGCCGTGAC CAGCCGCGAG CGCAACCCCG CGCTGCCGGA TGTGCCGACG
GTGATCGAGT CGGGCGTCAA GGGCTTCGAG GTGGTGGGCT TCTATGGTTT CTTCGCACCG
AAGGACACGC CCAGGGACGT GGTCGCCAAG CTCAGCGACG CGTTCAAGCA GGTGCTGACG
AGCGCAGAGG TGCGCGACCG GATGGTGAGC CAGGGCGCGG ACCCGGCCTA TCTGGGCAGC
GAGGACTTCG CGCGCTTTCT TGCCACGGAG ACGCCGCGCT GGGACAAGGC GGTGAAGGCT
TCGGGCGCGC GGATGGATTG A
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| Protein sequence | MTRPARAAFL AALFSIASFG IGGAAMAAYP DKPIKLVIGF PAGGPLDQHA RLLTDKLQAV
LGQPLIVDYK PGAGGSVGAD AVAKSPADGY TLMLANTGVA VINGALYSKL PYNTQRDFVP
IARTAMQPLA LLVTPKLPVQ NLRQFIDYAK ARPGQVNYGS AGNGGISHLV PEMFKTATGI
FMVHIPYRGS APAFTDLMAG QVQFMAESIP QAANYHKQGK VRALAVTSRE RNPALPDVPT
VIESGVKGFE VVGFYGFFAP KDTPRDVVAK LSDAFKQVLT SAEVRDRMVS QGADPAYLGS
EDFARFLATE TPRWDKAVKA SGARMD
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