Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3664 |
Symbol | |
ID | 7973897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3865571 |
End bp | 3866011 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794249 |
Product | Peroxiredoxin |
Protein accession | YP_002945547 |
Protein GI | 239816637 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | [TIGR03562] peroxiredoxin, OsmC subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.444391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAG ACAAGCACGC AAGCGTTCAC TGGGAAGGCG CCGGCAAGAC CGGCAAGGGC CAGGTCAGCA CCGAGACCGG CGCCCTCAAG GACTATCCCT ACGGCTTCGC CAGCCGCTTC GAGGACGACA AGCGCGGCAC CAACCCCGAG GAGATCGTCG GCGCGGCCCA TGCGGCCTGC TTCACGATGG CCTTTGCCTT CGCGCTGGAG AAGGAAGGCC TGACGGCCAC CCGCATCGAC ACCAAGGCCG CGGTGCGGCT GGCCAAGGAC GGCGAAGGCT TCAAGATCGA CCGCATCGCA CTCGAGCTCG ACGCCGCCGT GCCCAATCTG GAAGAAGCGA AGTTCCAGCA GATCGCGGCC GCCGCCAAGG CCGGCTGCCC GCTGTCGAAG GCACTGGCCA GCGTGCCGGA AATCACGCTG AAGGCGACGC TCGCCGGTTG A
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Protein sequence | MAADKHASVH WEGAGKTGKG QVSTETGALK DYPYGFASRF EDDKRGTNPE EIVGAAHAAC FTMAFAFALE KEGLTATRID TKAAVRLAKD GEGFKIDRIA LELDAAVPNL EEAKFQQIAA AAKAGCPLSK ALASVPEITL KATLAG
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