| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3662 |
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| Symbol | |
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| ID | 7973895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3863034 |
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| End bp | 3863561 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794247 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_002945545 |
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| Protein GI | 239816635 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.808999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGC GCTTTCCGTT CGCCGTTTGT CTTGCGTTGC TGCTGCCGCT GCTGTCGCAG
GCCGCTTCTT CGTCCCGCAC CTGCCTGGTG GTCGGCATCA GCGACGGCGA CACGCTCACG
GCGCGCTGCG GGCGCCTCGG TGCCTACGAG GAGGTCAAGG TGCGCATTGC CGCCATCGAC
GCACCTGAGC GCGCGCAGCC CTACGGCCAG CGCAGCAGGC AGGCGCTGAG CCGCATCTGC
TACTTCGAGC AGGCGGTCAT CACCGAGCGC GACACCGACC GCTACGGCCG CACCGTGGCC
GACGTGCGCT GCAACGGCGA GGATGCGGGC ACCCGCATGG TGGCCGAAGG CTGGGCCTGG
GTGTACGACT TCAACGGCAT CGCCACGCGC CGCGGCGGCG AACTGTTCAA GCTGCAGGAC
AGCGCGCGTG CGCAGCGGCT CGGGCTGTGG GCCGGCGCCA GGCCGCAGCC GCCCTGGGAA
TGGCGGCGCC GCCAGCGCGA GGACCACCCG GACCGCTTCC TGTTCTGA
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| Protein sequence | MRLRFPFAVC LALLLPLLSQ AASSSRTCLV VGISDGDTLT ARCGRLGAYE EVKVRIAAID
APERAQPYGQ RSRQALSRIC YFEQAVITER DTDRYGRTVA DVRCNGEDAG TRMVAEGWAW
VYDFNGIATR RGGELFKLQD SARAQRLGLW AGARPQPPWE WRRRQREDHP DRFLF
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