| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3660 |
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| Symbol | |
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| ID | 7973893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3860249 |
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| End bp | 3861505 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794245 |
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| Product | protein of unknown function DUF323 |
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| Protein accession | YP_002945543 |
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| Protein GI | 239816633 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1262] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTT CCCGGCCGAT CACCCAGGCG GCGAGCGCGC TGCGCGGCAA GTTCCGCGAA
GTGCGCGCCG CCAGCCTGGC ACTCGCCGCG CCGCTCTCCG CCGAAGACCA GTGCATCCAG
TCGATGCCCG ACGCGAGCCC GACCAAATGG CATCTCGCGC ACACGACCTG GTTCTTCGAG
ACCGTGCTGC TCCAGCCGCA TGCGGCGGGC TACCGGCCTT TCGACGAGCG GTTCCATTAC
CTCTTCAACT CGTACTACGA AGCGCTCGGC CCGCGCCATC CGCGCCCGCA GCGGGGGCTG
CTCACGCGCC CTTCCGTGGA CGAGGTGCAT GCCTACCGCG CCCATGTCGA CGAGGCAGTG
CTGGCGCTGC TCGACGACGC CGACGGCGAG CGCGATTGGG CGGCCATCGA GCCCATCGTC
ACGCTCGGAC TGCACCACGA GCAGCAGCAC CAGGAGCTGC TGCTCACCGA CATCCTGCAT
GCCTTGTCAT GCAACCCGCT GTTGCCCGCC TACCGGCCCG CGGCCGGGCC CGCGCTGCGG
CTGGCTGCCG TGCCGCCGGC CATGCGCTGG CTGCCGCAGC CCGGCGGCAT GGTGCAGGTG
GGCCACGAGG GGCCGCAGCA GGGCTTTGCC TTCGACAACG AAACGCCGCG CCATGCGGCC
CTGCTGCAGC CCTATGCCAT GGCCGACCGG CTGGTGAGCT GCGGCGACTA TGCGCAGTTC
ATTGCCGACG GCGGCTACCA GCGCCCCGAG CTCTGGCTCT CCGACGGCTG GGCGGCGGTG
CAGGCGCAGG GCTGGCGCCA TCCCGCCTAC TGGCTGGCCG CCGACGACCC GCGGCTGCAG
GCCCAGCAGC CGCAGGGCGG CTGGCAGGTG TTCGGCCTGC ATGGCGTGCG GCCGATGGAG
GCCGATGCAC CCGTGTCGCA GCTGAGCTTC TACGAGGCCG CCGCGTATGC CGAATGGGCC
GGTGCGCGCC TGCCGACCGA ATTCGAATGG GAAGCGGCCT TCGATGCGCC CGGCATCTCG
CAGATGACCG GCCACGTCTG GCAATGGACG CGCTCCTCCT ACGACCCGTA TCCCGGCTTC
AGGCCCATGC CCGGCATCGC GGCCGAATAC AACGGCAAGT TCATGGTGGG CCAACTGGTG
CTGCGTGGCG GCAGCGTGGC GACGCCGGCC GGGCACACGC GGCCCAGCTA CCGCAATTTC
TTTCCGCCGG CGGCGCGCTG GCAGTTCTCG GGGCTGCGGC TCGCGAAAGA CATCTGA
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| Protein sequence | MTLSRPITQA ASALRGKFRE VRAASLALAA PLSAEDQCIQ SMPDASPTKW HLAHTTWFFE
TVLLQPHAAG YRPFDERFHY LFNSYYEALG PRHPRPQRGL LTRPSVDEVH AYRAHVDEAV
LALLDDADGE RDWAAIEPIV TLGLHHEQQH QELLLTDILH ALSCNPLLPA YRPAAGPALR
LAAVPPAMRW LPQPGGMVQV GHEGPQQGFA FDNETPRHAA LLQPYAMADR LVSCGDYAQF
IADGGYQRPE LWLSDGWAAV QAQGWRHPAY WLAADDPRLQ AQQPQGGWQV FGLHGVRPME
ADAPVSQLSF YEAAAYAEWA GARLPTEFEW EAAFDAPGIS QMTGHVWQWT RSSYDPYPGF
RPMPGIAAEY NGKFMVGQLV LRGGSVATPA GHTRPSYRNF FPPAARWQFS GLRLAKDI
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