| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3658 |
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| Symbol | |
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| ID | 7973891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3857931 |
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| End bp | 3859082 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794243 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_002945541 |
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| Protein GI | 239816631 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTGGC AACCGAGAGA CCTGATGGAC ACCAAACGCG AATTCCTGGA ACTGGCCTTG
CAAGAAGGAG CCAACCGCCG CGAACTGTGC CGGCGCTTTG GCATCAGCCC CAAGACTGGC
TACGCGCTGC TGCGCCGCCA TGCACTCCAA GGCATGGGCG ATGCGTGCAC GCCGCGCAGC
ACCCGCCCGC ACCACAGTCC TGCGCGCAGC AGCGCTGTGA TCGAGCAAGC CGTTGTCGAA
CTGCGCCGCC AGCACCCTCG CTGGGGCGGA CGCAAGATCG CCCAGCGCCT GAGCGATCTG
GGCTTCAGCG GCGTGCCCGC ACCCAGCACC ATCACCGGCA TCCTGCATCG CCACGGACTG
ATCACCCCTG AAGCCAGCCA GGCGGCCGAG CATTGGCAGC GTTTCGAGCA CGAGCTCCCC
AACGCCCTGT GGCAGATCGA CTTCAAGGGC TACTTCGAGA CGGGCGCGGG GCGCTGTCAT
CCGCTGACGG TGATTGACGA TCACTCGCGC TTCAACCTGA CGATCGCCGC GTGCTCCCAG
ACGAACACCA CCCGCGTGCA GGATCATCTG CAGCGGGTGT TCCGGCGCTA CGGCTTGCCG
GTACGCATCA ACGCCGACAA CGGCGCGCCC TGGGGCAGCC CCGCCAAGGC CGAGCACGGG
CTGTCGGCGC TCAGCGTGTG GCTCATTCGT TTGGGCATTC GCATCAGCCA CAGCGCGCCC
TACCACCCGC AGACCAATGG CAAATTGGAG CGCTTCCATC GTTCGCTCAA GGCCGAGGTG
CTCAACGGAC GCAGCTTCAT GGACCTGGCT CAGGCTCAGG ACGCCTTCGA GCACTGGCGC
AGCGTGTACA ACCACGAGCG CCCGCACGAG GCGCTGGGCA TGCAAACACC CGCAGCGCGC
TATCAGGTGA GCCCTCGGGC CCTGCCTGCC GTGCTGGCAC CGATCGAATA TGGACCCGAT
GACCAGGTGC TCACGGTGGG CTGGAACGGC TGGGTGCACT TCGAGGGTCG CAAGCTGCGC
CTGTCCAGTG CCTTGCACAG GCTGCCCGTG GCGATGCGGC CGGCCCCCAA GGTTGACGGC
TGCTTCGACG CCTTCTTCTG CCACCACCGC TTCATGCGGC TGGACCTGCG CAACCTCGCC
ACTCCAACCT GA
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| Protein sequence | MPWQPRDLMD TKREFLELAL QEGANRRELC RRFGISPKTG YALLRRHALQ GMGDACTPRS
TRPHHSPARS SAVIEQAVVE LRRQHPRWGG RKIAQRLSDL GFSGVPAPST ITGILHRHGL
ITPEASQAAE HWQRFEHELP NALWQIDFKG YFETGAGRCH PLTVIDDHSR FNLTIAACSQ
TNTTRVQDHL QRVFRRYGLP VRINADNGAP WGSPAKAEHG LSALSVWLIR LGIRISHSAP
YHPQTNGKLE RFHRSLKAEV LNGRSFMDLA QAQDAFEHWR SVYNHERPHE ALGMQTPAAR
YQVSPRALPA VLAPIEYGPD DQVLTVGWNG WVHFEGRKLR LSSALHRLPV AMRPAPKVDG
CFDAFFCHHR FMRLDLRNLA TPT
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