| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3656 |
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| Symbol | |
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| ID | 7973889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3856637 |
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| End bp | 3857389 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794241 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945539 |
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| Protein GI | 239816629 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4340] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.415796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACGG CCGCGTTCGC TCCACCCTTT GTCCAGCCTG CCGAGCTGCA GGCTGCGCTG
CGCGAGCAAG GCTATGCCGT GTTGAGCCCG CAGGGCGTGA GCGACTGGCT GGGTGTGCCG
CTTGCGCAGC TCGAAGCACT GCATGCCGAC TGGAACGATC TCCCGCCGGA CGAATACCTG
AAGGACGGCG GCCGCTATCG CACGCGGCGC CACGCCTGCT TCACGGTCGA AGGCGATTCG
ATCGTGCAGG CGCCGCACCG CGCGCACTGG CAGCCGGTCG AATACAACGC GCTGCATGGC
GGCATGCAGC GCTGGTTCGC GCCCATGCAC GAAGCCACCG TGGCGCAGCC GGCCTGGCAG
CGCCTGCTGC AGCGCCTGGG CGAAGCCGCG AGCGGCATGC GCGGCGCGGC GGCGGCGCAG
CCGTGGTTCG TCGAGGCGCA CCAGTTCCGC ATCGACACCG CGGGCGGCAT CGGCCGGCCC
ACGCCTGAAG GCGCGCACCG CGACGGCGTC GACCTGGTGG CGGTGGCGCT GGTCGGGCGC
AGCGGCATCA AGGGCGGCGA GACGCGCGTG TTCGAAGCCA GCGGCCGCCG CGGCGAGCGC
TTCACCATGG CCGAGCCCTG GACGCTGCTC CTGCTCGACG ACGCGCGCGT GATCCACGAG
TCCACGCCGA TCCAGCCGCT CGAGGAGGGC GGCGCCGGCT GGCGCGACAC ACTCGTCGTC
ACCTGCCGCG CCGGGGCTTT CCAGGGGGAT TGA
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| Protein sequence | MTTAAFAPPF VQPAELQAAL REQGYAVLSP QGVSDWLGVP LAQLEALHAD WNDLPPDEYL
KDGGRYRTRR HACFTVEGDS IVQAPHRAHW QPVEYNALHG GMQRWFAPMH EATVAQPAWQ
RLLQRLGEAA SGMRGAAAAQ PWFVEAHQFR IDTAGGIGRP TPEGAHRDGV DLVAVALVGR
SGIKGGETRV FEASGRRGER FTMAEPWTLL LLDDARVIHE STPIQPLEEG GAGWRDTLVV
TCRAGAFQGD
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