| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3652 |
|---|
| Symbol | |
|---|
| ID | 7973885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 3853755 |
|---|
| End bp | 3854036 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644794237 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_002945535 |
|---|
| Protein GI | 239816625 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTCC GGCTCGAACC GTCGGGCCTC GGCTTCGACG CCGAGGCCGG CACCACGCTC
TTGAAATCGG CCGAGGCGGC CGGCATCGAA ATGCCGAGCT CCTGCCGCAA CGGCACCTGC
CGCACCTGCA TCTGCCAGCT GGTGGCAGGC TCCATCCGCC ACATCATCGA ATGGCCCGGC
CTGAGCGCCG AGGAAAAGGC CGAGGGCTGG ATCCTGCCCT GCGTGGCCGA GGCACAGAGC
GACCTCACGA TCGATGCGCC CCAGGCGTTT TCGGTGTTCT GA
|
|---|
| Protein sequence | MRVRLEPSGL GFDAEAGTTL LKSAEAAGIE MPSSCRNGTC RTCICQLVAG SIRHIIEWPG
LSAEEKAEGW ILPCVAEAQS DLTIDAPQAF SVF
|
|---|
| |