| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3648 |
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| Symbol | |
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| ID | 7973881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3851684 |
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| End bp | 3852592 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794233 |
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| Product | protein of unknown function DUF808 |
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| Protein accession | YP_002945531 |
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| Protein GI | 239816621 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2354] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA GCCTGCTTCT GCTGCTCGAC GACATCGCCA CCGTCCTGGA CGACGTCTCG
GTCCTCACCA AGGTGGCCGC CAAGAAGACG GCCGGGGTGC TCGGCGACGA CCTTGCGCTC
AATGCGCAGC AGGTCTCGGG CGTCAAGGCC GACCGAGAGC TGCCGGTGGT CTGGGCGGTG
TGCAAGGGCT CGTTCGTCAA CAAGCTCATC CTGGTGCCCG CGGCGCTGGC CATCGGCACC
TGGCTGCCCT GGCTGGTCAC GCCGCTCCTG ATGGTGGGTG GTGCCTTCCT TTGCTTCGAG
GGCTTCGAGA AGCTCGCCCA CAAGTTCCTG CACAGGCAGG CGCACGAGGC CGACACCGCG
CGCCACGAGC GCGCCGTGGC CGACGAGGCC GTCGACGTGG TGGCGGCCGA GAAGGACAAG
ATCAAGGGCG CGGTGCGCAC CGACTTCATT CTCTCGGCCG AGATCATCGC CATCACGCTG
GGCACCGTGC AGGGCCAGTC CTTTCTCACG CAGCTCACCG TGCTGGCGGG CATTGCACTG
GTCATGACCA TCGGCGTCTA TGGCCTGGTG GCCGGCATCG TGAAGCTCGA CGACGCGGGC
CTCTACCTGA GCCGGAAGGC GAGCAAGGCC GCGCAGGCCC TGGGCCGCGG CATCCTCGCG
GCCGCGCCCT GGCTCATGAA GGCGCTGTCG GTGGCCGGCA CCGCGGCCAT GTTCCTGGTG
GGCGGCGGCA TCCTGGTGCA CGGCGTGCCG GCCCTCGGCC ATGCCGTCGA AGACTGGGCC
AAGGCCACCG GCGGCGTGTT CGGCGCAATC GGGTCGATGG GGGTGAATGC GGGCATCGGC
ATCGTGGCGG GCGCCATCGT GCTGGCGTGC GTGGAGCTCG CCGGCAAGCT GCGCGGCAAG
AAGGGCTGA
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| Protein sequence | MATSLLLLLD DIATVLDDVS VLTKVAAKKT AGVLGDDLAL NAQQVSGVKA DRELPVVWAV
CKGSFVNKLI LVPAALAIGT WLPWLVTPLL MVGGAFLCFE GFEKLAHKFL HRQAHEADTA
RHERAVADEA VDVVAAEKDK IKGAVRTDFI LSAEIIAITL GTVQGQSFLT QLTVLAGIAL
VMTIGVYGLV AGIVKLDDAG LYLSRKASKA AQALGRGILA AAPWLMKALS VAGTAAMFLV
GGGILVHGVP ALGHAVEDWA KATGGVFGAI GSMGVNAGIG IVAGAIVLAC VELAGKLRGK
KG
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