| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3624 |
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| Symbol | |
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| ID | 7970699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3834105 |
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| End bp | 3834524 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794209 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_002945507 |
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| Protein GI | 239816597 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCGACA CCATCCAGGC CATCAACAAG ACCGCTGCCT TCAACCGCTG GGCCGGCTTC
GAGGTCACGC GCGCCGCCGA CGGCGAAGCC GAATTGCGCA TGCAATGGCG CGAGGAAGAC
ATGGGCCAGT ACGCCGGCTT CCTGCATGCC GGGTTGATCG GCGCCATGCT CGACACCGCC
TGCGGCTTCG CGGCCGCCAC GGTGGCGGGC CGCGTACTCG CCTCGCACTT CTCGGTGAAT
TGCCTGTCGC CCGCGCTGGG CCGTGCCTTC ATCGCGCGCG GCAAGGTGGT GAAGGCGGGG
CGCAAGCAGG TGTTCACCAC CGCCGAGCTC TATGGCCAGG GCGATGGCGA CAGCCTCAAG
CTCGTGGCGA CGGGGACTGC CATCCTGGTT CCGGTGGAAG CGCCTCCGCC CGCAAAGTGA
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| Protein sequence | MLDTIQAINK TAAFNRWAGF EVTRAADGEA ELRMQWREED MGQYAGFLHA GLIGAMLDTA
CGFAAATVAG RVLASHFSVN CLSPALGRAF IARGKVVKAG RKQVFTTAEL YGQGDGDSLK
LVATGTAILV PVEAPPPAK
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