| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3621 |
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| Symbol | |
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| ID | 7970696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3830513 |
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| End bp | 3831715 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794206 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_002945504 |
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| Protein GI | 239816594 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAC TCAAACAGGG CGCAGACGCG CTGTTCATTC TTCTCGGCGC GATCATGGTG
CTGGCCATGC ATGCCGGTTT CGCCTTCCTG GAACTGGGCA CCGTGCGCAA GAAGAACCAG
GTCAATGCGC TGGTTAAGAT CCTGGTCGAC TTCTCGGTCT CGACCATCGT GTACTTTCTG
GTGGGCTATG GCGTGGCCTA CGGCACCCAC TTCTTCGTGG GCGCCACCGA GCTCGCAGCA
AAAAGCGGCT ACGAACTCGT GAAGTTCTTC TTCCTGCTCA CCTTCGCGGC GGCCATTCCG
GCGATCATCT CGGGCGGGAT TGCCGAACGT GCCAAGTTCT GGCCGCAACT GATCGCTACC
GCGGTCATCG TCGGCTTCGT CTATCCGCTG TACGAGGGCA TTGCCTGGAA CAAGGCCTTC
GGCATCCAGG CCTGGATCGC TTCGGCCACG GGCAGCGAGT TCCATGACTT TGCCGGCTCG
GTGGTGGTGC ACGCGGTGGG CGGCTGGCTC GCCTTGCCGG CCGTGCTGCT GCTGGGCGCG
CGCCGCAACC GCTACCGCGG CGACGGCTCG CTGAGCGCGC ATCCGCCGTC GAACATTCCT
TTTCTGGCGC TGGGGGCCTG GGTGCTGTGC GTCGGCTGGT TCGGCTTCAA CGTCATGAGC
GCGCAGAGCA TCGACAAGAT CTCCGGCCTG GTGGCCGTCA ACTCGCTCAT GGCAATGGTC
GGCGGCACGC TGGTTGCGCT GGCGCTGGGC AAGAACGACC CCGGCTTTGT CTACAACGGC
CCGCTCGCCG GTCTCGTGGC CGTGTGCGCG GGGTCCGACC TGATGCATCC GCTGGGCGCG
CTGGTGGTGG GCGGCGTGGC CGGGGCCATC TTCGTGGTGA TGTTCACGCT CACGCAGAAC
AAATGGAAGA TCGACGACGT GCTCGGCGTC TGGCCGCTGC ACGGCCTGTG CGGCACCTGG
GGCGGCATCG CGGCCGGCAT CTTCGGCACC CAGGCGCTCG GCGGCATCGG CGGCGTGAGC
GTCTGGGCGC AGCTCATCGG CACCTTGATG GGCGTGGCGT GGGCGGCGCT GGCCGGAGCG
GCGGTGTACG GCGCGCTCAA GGCGACGATG GGGCTGCGGC TCACGCAGGA AGAGGAATAC
GACGGCGCCG ACCTGTCGAT CCACCACATC TCGGCGACGC CGGAGCGTGA GGTGAACTGG
TAG
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| Protein sequence | MDALKQGADA LFILLGAIMV LAMHAGFAFL ELGTVRKKNQ VNALVKILVD FSVSTIVYFL
VGYGVAYGTH FFVGATELAA KSGYELVKFF FLLTFAAAIP AIISGGIAER AKFWPQLIAT
AVIVGFVYPL YEGIAWNKAF GIQAWIASAT GSEFHDFAGS VVVHAVGGWL ALPAVLLLGA
RRNRYRGDGS LSAHPPSNIP FLALGAWVLC VGWFGFNVMS AQSIDKISGL VAVNSLMAMV
GGTLVALALG KNDPGFVYNG PLAGLVAVCA GSDLMHPLGA LVVGGVAGAI FVVMFTLTQN
KWKIDDVLGV WPLHGLCGTW GGIAAGIFGT QALGGIGGVS VWAQLIGTLM GVAWAALAGA
AVYGALKATM GLRLTQEEEY DGADLSIHHI SATPEREVNW
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