| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3617 |
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| Symbol | |
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| ID | 7970692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3827020 |
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| End bp | 3827988 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794202 |
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| Product | Peptidase M23 |
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| Protein accession | YP_002945500 |
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| Protein GI | 239816590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTTGT CCGGTTCCTT TGTGTTCGCT GCGCCCTTGT TTGTTCGCTT CGCAAGCCTC
GAGTTCAACG CCATGCATCC CTCGCTTCCC GAATCCGCTC CATCCGGCCT CGGCCGCCGC
TCCGCCCTGC TCGGCACCTT CGGCCTCGTG GCATTGGCCT CGGCGCGCGC CGTTGCGGCG
GCTCCCTCGG CCAAAAAGAA GCAGCCGGAG GTCTGGCCGC ATGCATCGCA GGTGCCGGGC
GGCGTGGCCC GCCTGTCGCT CGGTCCGGCG GCCAGGCGCC CGCAGGCCTT CTCCAGCGAC
CTGCCGCTGC TGGTGGTGGG CGACGCCATC GAGTGGACCG CGCTCGTGGG CATTCCGCTC
GCAGCCGTGC CGGGCGAGGC GAGCATCGCG GTGCGCACCG AGGGCGGCAA CGAAAAGCAG
ATCGCCTACA CCGTGAGCCC CAAGCAATAC CGCGAGCAGC GCCTCACGGT GCCGCCGCGC
ACCGTCGACC TGTCGCCGGA GGACGAAGCG CGCTACGAGC GCGAGCGCGC GCACCTCGCC
ACCGTGATGG CCACCTTCAC CGACTTGCGG CCCGACGCCG CGCTGCAGAT GCGCGTGCCC
GTGCCCGGCC GCCGCTCCAG CTCCTTCGGC CTGCGCCGCG TGTTCAACGG CCAGTCGCGC
AATCCGCACA GCGGCATGGA CATCGCGGCC GGCACCGGCA CGCCCGTGCT GGCGCCGCTG
CCGGGGCGCG TGATCGACAC CGGCGACTAC TTCTTCAACG GCGGCACGGT GTGGCTCGAC
CACGGCGGCG GCCTGCTCAC GATGTATTGC CACCTGAGCC GCATCGATTC AAAGGTGGGC
GACGTGCTGA AGACCGGCGA GCAGCTCGCC GCCGTGGGCG CCACCGGGCG CGTGACGGGA
CCGCATCTGC ATTGGTCCGT GATGCTCAAT CGGGCGATGG TGGATCCGGC GTTGTTCGTT
GCGGCGTGA
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| Protein sequence | MFLSGSFVFA APLFVRFASL EFNAMHPSLP ESAPSGLGRR SALLGTFGLV ALASARAVAA
APSAKKKQPE VWPHASQVPG GVARLSLGPA ARRPQAFSSD LPLLVVGDAI EWTALVGIPL
AAVPGEASIA VRTEGGNEKQ IAYTVSPKQY REQRLTVPPR TVDLSPEDEA RYERERAHLA
TVMATFTDLR PDAALQMRVP VPGRRSSSFG LRRVFNGQSR NPHSGMDIAA GTGTPVLAPL
PGRVIDTGDY FFNGGTVWLD HGGGLLTMYC HLSRIDSKVG DVLKTGEQLA AVGATGRVTG
PHLHWSVMLN RAMVDPALFV AA
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