| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3615 |
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| Symbol | |
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| ID | 7970690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3824854 |
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| End bp | 3826668 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794200 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_002945498 |
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| Protein GI | 239816588 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCC CGACCGACAA AGACAGCGCA AAAACAGCCG CTGCACCGAG CAATTTCCTG
CGCCACGTGA TCGAAAACGA CCTTGCGCAG GGGGCCTATT CTGGCCGCAA ATGGGGTGGC
TCGCCCGGCG ACGCCGCCCA TCACGCCCAG GGCATGCCCG ACCCGGCCAA GGTGCGCATG
CGCTTTCCGC CCGAGCCCAA CGGCTACCTG CACATCGGCC ACGCCAAGAG CATCTGGCTG
AATTTCGAGC TGGCCAGGGA ATACGGCGGC GTCTGCCACC TGCGCTTCGA CGACACCAAC
CCGGAGAAGG AAGAGCAGGA ATACGTCGAT TCCATCCGCG ACGCCGTCCA GTGGCTCGGC
TACGAAACCC ACCTGGCCGA CCGCCCCACG GCCCCCGGCA CCCTGCAGCC GCACGAATAC
TTCGCAAGCG ACTACTTCGA CTTCATGTAC CGGGCCGCCG AATACCTGAT CGGCGCCGGC
CTGGCCTATG TGGACGAGCA AAGCGCCGAG GAAATCCGCG CCAACCGCGG CGACTTCAAC
ACGCCCGGCA CCGACAGCCC GTTCCGCAGC CGCAGCGCGG AAGAAAACCT CGCCCGCTTC
CGCGCCATGC GTGACGGCCA GCTGCCTGAC GGCGCCGCCA TCCTGCGCGC CAAGATCGAC
ATGGCGAGCC CCAACATCAA CATGCGCGAC CCGGCGCTCT ACCGCATCCG CCGGGCCACA
CACCACAACA CCGGCGACAA GTGGTGCATC TACCCGATGT ACACCTTTGC GCATCCCATC
GAGGACGCGC TCGAGCAGAT CACCCATTCC ATCTGCACGC TGGAATTCGA AGACCAGCGC
CCCTTCTACG ACTGGCTGCT CGACCGCCTG GCCGAAGGCG GCCTCATCGC AAGCCCGCAT
CCGCGCCAGT ACGAATTCGC GCGCCTCAAC GTCACCCATG TGCTCACCAG CAAGCGCAAG
CTGCGCCAAC TGGTCCAGGA AAAGCACGTC GACGGCTGGG ACGACCCGCG CATGCCCACC
CTCGCGGGCC TGCGCCGCCG CGGCTACACG CCCGAGGCGC TGCGCCTGTT CTGCGAACGC
AGCGGCACCA CCAAGTCCGG CGGCTGGATC GACTACGCGA GCCTGGAAGC CGCGCTGCGC
GACACCCTCG ACCCCATCGC GCCGCGCGCC ATGGCCGTGC TCGACCCGGT CAAGCTGGTG
ATCACCAACT GGGGCGAACT GATGGGCGGC GACGACGTGC TCGACGACTG CTCCGCCCCC
GTGCATCCGC ACCACCCCGA AATGGGCAAA CGCGAATTCA AGCTCGGCCG CGAGGTCTGG
ATCGAGCGCA CCGACTACGA GGAAGTGCAG CCCAAGGGGT TCTTTCGCCT GTTCCCGGGA
AACAAGGTGC GCCTCAAGTA CGGCCACGTC ATCGAATGCA CCGGCGGCAC CAAGGACGCG
AGCGGCAAGC TCGTCGAAGT GCAGGCCACG CTGGTGCCCG ACACCAAGAG CGGCACGCCG
GGCGCGGACG CCATCAAGGT GAAAGGCAAC ATCACCTGGG TGGCTGCGGC CGATGCGGTC
GAGGCCGAGG TGCGGCTGTA TGAGCGGCTG TTTGCGGCGG CCAATCCGGG CAGCGGCGAG
CTGCTCGACG AGCTCAACAA GACGAGCCTG GAGGTTTGCT CCGCGTATGT CGAACCGTCG
CTGGCCAAGG CGCAGGACGG TGCGGCATTC CAGTTCGAGC GGCACGGGTA CTTCGTGCTC
GATGCGAAGG CGAGTGCCGG CGGCAAGCGC GTGTTCAATC GCGCTGCGGG CATGCGGGAC
AGCTGGGGCA AGTAA
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| Protein sequence | MTSPTDKDSA KTAAAPSNFL RHVIENDLAQ GAYSGRKWGG SPGDAAHHAQ GMPDPAKVRM
RFPPEPNGYL HIGHAKSIWL NFELAREYGG VCHLRFDDTN PEKEEQEYVD SIRDAVQWLG
YETHLADRPT APGTLQPHEY FASDYFDFMY RAAEYLIGAG LAYVDEQSAE EIRANRGDFN
TPGTDSPFRS RSAEENLARF RAMRDGQLPD GAAILRAKID MASPNINMRD PALYRIRRAT
HHNTGDKWCI YPMYTFAHPI EDALEQITHS ICTLEFEDQR PFYDWLLDRL AEGGLIASPH
PRQYEFARLN VTHVLTSKRK LRQLVQEKHV DGWDDPRMPT LAGLRRRGYT PEALRLFCER
SGTTKSGGWI DYASLEAALR DTLDPIAPRA MAVLDPVKLV ITNWGELMGG DDVLDDCSAP
VHPHHPEMGK REFKLGREVW IERTDYEEVQ PKGFFRLFPG NKVRLKYGHV IECTGGTKDA
SGKLVEVQAT LVPDTKSGTP GADAIKVKGN ITWVAAADAV EAEVRLYERL FAAANPGSGE
LLDELNKTSL EVCSAYVEPS LAKAQDGAAF QFERHGYFVL DAKASAGGKR VFNRAAGMRD
SWGK
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