| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3612 |
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| Symbol | |
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| ID | 7970687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3822370 |
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| End bp | 3823437 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794197 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_002945495 |
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| Protein GI | 239816585 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTTG AAGCGCTCCC TCGTTTCCGC GCGGAGAACG TCCGGGGCAT GCTGCGGCAT
GGCCTGATCA CCGTCGTGTT CTGCTGCTTC ATTGCCGCCG CGCTGGCCAT CACACAGCAC
GGGGACTGGG GGGCGCAGAT GGTGTATTCG CTGTCGATCG GGCTGATCAG CTGGCTCTTC
ATCGACGTGG GCCGGCTGCT GATCAGCGGC CACCGTGAAG TGCTCTGGCC GCCCGGCCCC
TGGGGCTATC TGCTGGTGGC AGGCGGCGTG GCGGTGGGCT TCCTGGGGGG CAATGCGATC
GGCGATGCCT GGACCCACCA GCCTCTGCTC GACTTCGGCA ACTTCACGGA ACGCAAGCTC
GCGACCACGA TCGTCATCAC GCTGACGGCC ACCGTCTGCA TGTGCTTCTT CTTCTACAGC
CTGGGCCGGA GCAAGTACAT GCGCAGCCAG CTCGACCTGG CGCAGCGCAA CGCCACCGAA
GCCCGGCTCA AACTGCTGGA GACGCAGTTG GAGCCGCACA TGCTGTTCAA CACGCTGGCC
AACCTGCGCG TGCTGATCAC GGCCGATCCG CCGCGCGCCG TGGCCATGCT CGACCGCCTC
AACAACTACC TGCGCATGAC GCTCAGCGGC TCGCGCGCCC TGTCGCACCC ACTGTCGGCC
GAGTTCGAAC GGCTGGCCGA CTACCTTGAG CTGATGTCCG TGCGCATGGG CGAGCGCCTG
CGCTACACGC TCGACCTGCC CGATGAATTG CGCGGCACGC CGGTGCCGCC GCTGCTGCTG
CAGCCGCTGG TCGAAAACAG CATCCGCCAC GGGCTCGAAC CCAAGGTCGA AGGCGGCGCG
ATCGACGTGC GCGCGCGGCA GCTCGACGGC CGGTTGATCA TCGAAGTGAG CGACACCGGC
GTCGGCCTGG ATGCAGCGCA GCCTTCCGAA GGCAGCGGCT TCGGGCTCGA GCAGGTGCGC
GAACGGCTTG CCACCGTGTA TGGCGACCAG GGCCGCATGA GCCTGGCCGC CGGGCCTTCG
GGCGGAACCC TTGCCACACT CAGCTTTCCA TTGCAGCCCC GTTCATGA
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| Protein sequence | MSVEALPRFR AENVRGMLRH GLITVVFCCF IAAALAITQH GDWGAQMVYS LSIGLISWLF
IDVGRLLISG HREVLWPPGP WGYLLVAGGV AVGFLGGNAI GDAWTHQPLL DFGNFTERKL
ATTIVITLTA TVCMCFFFYS LGRSKYMRSQ LDLAQRNATE ARLKLLETQL EPHMLFNTLA
NLRVLITADP PRAVAMLDRL NNYLRMTLSG SRALSHPLSA EFERLADYLE LMSVRMGERL
RYTLDLPDEL RGTPVPPLLL QPLVENSIRH GLEPKVEGGA IDVRARQLDG RLIIEVSDTG
VGLDAAQPSE GSGFGLEQVR ERLATVYGDQ GRMSLAAGPS GGTLATLSFP LQPRS
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