| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3610 |
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| Symbol | |
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| ID | 7970685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3821127 |
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| End bp | 3822080 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794195 |
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| Product | fatty acid hydroxylase |
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| Protein accession | YP_002945493 |
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| Protein GI | 239816583 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.52753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTGC TCTTTCTGAT CCTCAAGATT GCCGTCACGG TGGTGCTCGC CGCCTCCATT
GCCGAAGCAC TGGTGCTGTC GTGGCGCCAC GGCTGGCGCA GCTACGACTG GAAGGCGGCC
GGCGTCTCGG TGGTCGACTT CCTGGTGCGC GAATACCCGC TGCGCTGGCT GCTGCCGCTG
GCCTTCTGGA CCGGCGCCAT GGACTGGTTC TGGAACCACC GGCTCTTCAC GCTGCCCATG
GACCACTGGA GCGGCTGGGT CGCCTGCTTC ATCGGCCAGG AGTTCTGCTA CTACTGGTAC
CACCGCGCCG CCCACCGCGT GCGCTGGTTC TGGTGCACGC ATGCCATCCA TCATTCGCCG
AACCAGCTCA ACCTGTCGGC CGCCTACCGC TTCGGCTGGA CCGGCCGGCT CAGCGGCACG
CTCGCCTTCT TCATGCTCGC GCCGCTGCTG GGCATGCCGC CCAAGGTGAT CCTGCTGATG
CTCACGCTGA ACCTGCTCTA CCAGTTCTGG ATCCACGCGG CCTGGATTCC CAAGCTCGGC
CCGCTGGAAT GGGTGCTCAA CACGCCCTCG GCCCACCGCG TGCACCACGC CTCGAACCTC
GAGTACCTGG ACGGCAACTA CGGCGGCGTG CTGATCGTGT TCGACCGCCT GTTCGGCACC
TACATCCCCG AGCGCGCCGA CCTGCCCTGC CGCTACGGGC TGGTGCAGCC GATCGTCTCC
AACAACATCC TCGAGATCGA GTTCACCCAC TGGCGTGCGC TGCTGCGCGA CCTGCGCTCG
GCGCGCTCGG TGCGGGCTTT CGTCGGCTAC CTCTTCAAGC CGCCGGGCTG GCGGCCCGAC
GGGCCCGGCG AGACGACCGA GGAGCTGCGG CAGCGGGCGG CGCTGCAATC GTCGCCAGCG
CAGCCGCCGT CCGCCCCCGA ATTCATTCCG GTTCAATTCA AGGAGTTGTC ATGA
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| Protein sequence | MAVLFLILKI AVTVVLAASI AEALVLSWRH GWRSYDWKAA GVSVVDFLVR EYPLRWLLPL
AFWTGAMDWF WNHRLFTLPM DHWSGWVACF IGQEFCYYWY HRAAHRVRWF WCTHAIHHSP
NQLNLSAAYR FGWTGRLSGT LAFFMLAPLL GMPPKVILLM LTLNLLYQFW IHAAWIPKLG
PLEWVLNTPS AHRVHHASNL EYLDGNYGGV LIVFDRLFGT YIPERADLPC RYGLVQPIVS
NNILEIEFTH WRALLRDLRS ARSVRAFVGY LFKPPGWRPD GPGETTEELR QRAALQSSPA
QPPSAPEFIP VQFKELS
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