| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3598 |
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| Symbol | |
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| ID | 7970673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3804726 |
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| End bp | 3805547 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794183 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002945481 |
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| Protein GI | 239816571 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CTCCGGAGCT CCCCCCTCTC TCCCCCGCGA CCCGCGAACG CCGCCAGCGC
GTGCAATCGG CCGAGACCGG CATGGCGGTG CTCAAGGGGC TGGCCCACCT GGGCGGCCGC
AGCAGCCTGA CGGCCCTGTC GGCCCACGTG GCCGAAAGCC CGGCCAAGGT GCACCGCTAC
CTCGCCAGCC TGATGGAGGA AGGGCTGGTG CTGCAGGACG CCGTCTCGCA GCACTATTAC
CTGGGTACGG AAGCCATCCA GATCGGCCTG GCCGCCATGC GCCAGGCCGA CCCGATCCGC
GCGGCCGAGC CCTGCCTCGT GCGGCTGCGC GAATCGCTGG AAGTGACCTG CTTCGTCGCG
GTCATGGGCA ACAAGGGGCC GACCATCGTG CGCTTCGAGG AGCCGGGCCT GCCGGTCACG
GTGAACGTGC GCGCCGGCTC GGTGATGTCG ATGCTCTGGT CGGCCACCGG ACGCGCGTTC
CTGGGCCTGC TCGACGAGTC GCGGGTGCTG GCGCTGGCCG AGCAGGAACT GGCCGATTCA
CCGGAAGACA TGCGGGCCAC GCTGGACGCG AAGGACCCCA TCGGCCAGCT GCGGCGCGAG
GTGCAACTGG CCCGCTGCGC GAGCGTGAAG GACACCTACC TGCGCGGCAT CAGCGCCGTG
GCGGCGCCGG TCTACGACTA TGCGGGCCGG GTGTGCGCGG TGCTGACCGC GCTGGGCGCC
ACAGGCGGCT TCGACCCGGC CATCGACGGC CCGATCGCCA CCGCGGTGCG GCAGGAAGCC
CGTGCCGCGA GCGCCATCCT GGGGCACGGG AACGGCGCCT GA
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| Protein sequence | MTQAPELPPL SPATRERRQR VQSAETGMAV LKGLAHLGGR SSLTALSAHV AESPAKVHRY
LASLMEEGLV LQDAVSQHYY LGTEAIQIGL AAMRQADPIR AAEPCLVRLR ESLEVTCFVA
VMGNKGPTIV RFEEPGLPVT VNVRAGSVMS MLWSATGRAF LGLLDESRVL ALAEQELADS
PEDMRATLDA KDPIGQLRRE VQLARCASVK DTYLRGISAV AAPVYDYAGR VCAVLTALGA
TGGFDPAIDG PIATAVRQEA RAASAILGHG NGA
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