| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3596 |
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| Symbol | |
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| ID | 7970671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3801269 |
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| End bp | 3803617 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794181 |
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| Product | ferredoxin |
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| Protein accession | YP_002945479 |
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| Protein GI | 239816569 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2124] Cytochrome P450 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATA CCGCCATGCC TTCGCGCACT TCCGGCTGCC CCGTCGCGCA CGGGCCGCTG
TCTTCCGAGC GCACGCCCAC CGGCTGCCCT GTGAGCGCGC GCGCCGCCGA GTTCGACCCC
TTCGAGGACG GCTACCAGCA GGACCCGCCC GAGTACGTAC GCTGGGCGCG CGAGAAGGAG
CCGATCTTCT TCAGCCCCAA GCTCGGCTAC TGGGTGATCA CGCGCTACGA CGACATCAAG
GCGGTGTTCC GCGACAACAT CACCTTCAGC CCCTCCAACG CGCTCGAGAA GATCACGCCC
ACCGGCGACG AGGCCAACGC CGTGCTCGCC TCCTACGGCT TCGCGCTGAA CCGCACGCTG
GTCAACGAGG ACGAGCCCGC CCACATGCCG CGCCGCCGCG TGCTGATGGA CCCGTTCACG
CCCGAGGCGC TCAAGCACCG CGAGCCGATG GTGCGCGAGC TGGCGCGCAG CTATGTCGAC
CGCTTCATCG ACGACGGCCG TGCCGACCTC GTCGACCAGA TGCTGTGGGA AATTCCGCTG
ACCGTGGCGC TGCACTTCCT TGGCGTGCCC GAGGAAGACA TGGACACGCT GCGCAAGTAT
TCGATCGCGC ACACCGTCAA TACCTGGGGC CGCCCCAAGC CCGAGGAGCA GGTGGCCGTG
GCGCATGCGG TCGGCAACTT CTGGCAGTAC GCTGGCAAGG TGCTCGAGAA GATGCGCCAG
GACCCCGACG CGCCCGGCTG GATGCAGTAC GGCATCCGCA AGCAGAAGCT GCACCCCGAG
GTGGTGACCG ACTCGTACCT GCACTCGATG ATGATGGCCG GCATCGTGGC CGCGCACGAG
ACCACCGCCA ATGCCAGCGC CAATGCAGTC AAGCTGCTGC TGCAGCATCC GCAGGTGTGG
CAGGAGCTGT GCGAAGACCC GGGCCTCATT CCCAACGCGG TGGAAGAGTG CCTGCGCCAC
AACGGCTCGG TGGCCGCGTG GCGGCGCCTC GTCACGCGGG ACACGCAGGT GGGGGGCGTC
GACCTGCCGG CCGGCTCGCG GCTCCTGATC GTCACCTCGT CGGCCAACCA TGACGAAGCG
TATTTTTCCG ATGCCGACCT GTTCGACATC CGCCGCGACA ACGCCAGCGA CCACCTGACC
TTCGGCTACG GCTCGCACCA GTGCATGGGC AAGAACCTCG CGCGCATGGA GATGCAGATC
TTCCTGGAGG AATTCACGCG GCGGCTGCCG CACATGCGGC TCTCGGAGCA GCGCTTCAGC
TACGTGCCGA ACACCTCGTT CCGCGGGCCC GAACACCTGT GGGTCGAGTG GGACCCGGCG
GCCAATCCGG AGCGCAGGAA CCCCGCGCTG CGCGCGGTGC AGGTGCCGGT GCGCATCGGC
GAGCCCTCGC GGCACGCGAT CACGCGGCCG GTGGTGGTGG AGCGCGTGAC GCCGGTGGCC
GAGGGCATCG TCAAGCTGCG GCTCGCGTCG CCCGATGGCA AGCCGCTGCC GCGCTGGACC
GCCGGTTCGC ACATCGACGT GGAATGCGGC TCGCCCGAGC GGTCGCGCCA GTATTCGCTG
TGCGGCGACC CGGGCGAAGC CGGCGTGTTC GAGATCGCGG TGCTGCATGA GCCCGAAGGC
CGCGGCGGCT CGGCCTGGGT GCATGCGCAG GTGAAGGCCG GCGACCGGCT GCGCATTCGC
GGGCCGCGCA ATCACTTCCG GCTCGACGAG TCGCTGGCGA AGGCGATCTT CATCGCGGGC
GGCATCGGCA TCACGCCCGT CAGCGCGATG GCGCGCCGCG CGAAGGCGCT CGGCATGGAC
TACGAGCTGC ACTACAGCGG CCGCAGCCGC GCGCGCATGG CCTTCCTGGA CGAGCTCGCG
GCGCTGCACG GCGAGCGGCT GCAGGTCCAT GCGAGCGACG AAGGGCGGCG CTGCGACCTG
CGCGCGCTGC TTGCCGAGCC GGTGGCCGGT GCGCAGGTCT ATGCCTGCGG ACCGCTGCGC
ATGCTCGAGG CGCTCGAAGA CTGCTGCGCC GCCTGGCCCG AGGGTGCCTT GCGCGTCGAG
CATTTCGAGT CGACGCTCGC CACCCTCGAT CCGTCGAAGG AGCATGCCTT CGAGGTCGAG
CTGAAGGATT CCGGCCTGGT GGTCAACGTG CCGCCCGGCC AGACCCTGCT GTCGGCGCTG
CGCGCCGCCA ACGTCGACGT GCAGAGCGAT TGCGAGGAGG GCCTGTGCGG CTCCTGCGAA
GTGCGGGTGC TGTCCGGCAA GGTCGATCAC CGCGACGTGG TGCTGACCCG CCCGGAACGC
GAGGCCCACA ACAAGATGAT GGCCTGCTGC TCGCGCGCCT GCGAAGGCCG GCTGGTGCTC
GAGCTCTAG
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| Protein sequence | MSDTAMPSRT SGCPVAHGPL SSERTPTGCP VSARAAEFDP FEDGYQQDPP EYVRWAREKE
PIFFSPKLGY WVITRYDDIK AVFRDNITFS PSNALEKITP TGDEANAVLA SYGFALNRTL
VNEDEPAHMP RRRVLMDPFT PEALKHREPM VRELARSYVD RFIDDGRADL VDQMLWEIPL
TVALHFLGVP EEDMDTLRKY SIAHTVNTWG RPKPEEQVAV AHAVGNFWQY AGKVLEKMRQ
DPDAPGWMQY GIRKQKLHPE VVTDSYLHSM MMAGIVAAHE TTANASANAV KLLLQHPQVW
QELCEDPGLI PNAVEECLRH NGSVAAWRRL VTRDTQVGGV DLPAGSRLLI VTSSANHDEA
YFSDADLFDI RRDNASDHLT FGYGSHQCMG KNLARMEMQI FLEEFTRRLP HMRLSEQRFS
YVPNTSFRGP EHLWVEWDPA ANPERRNPAL RAVQVPVRIG EPSRHAITRP VVVERVTPVA
EGIVKLRLAS PDGKPLPRWT AGSHIDVECG SPERSRQYSL CGDPGEAGVF EIAVLHEPEG
RGGSAWVHAQ VKAGDRLRIR GPRNHFRLDE SLAKAIFIAG GIGITPVSAM ARRAKALGMD
YELHYSGRSR ARMAFLDELA ALHGERLQVH ASDEGRRCDL RALLAEPVAG AQVYACGPLR
MLEALEDCCA AWPEGALRVE HFESTLATLD PSKEHAFEVE LKDSGLVVNV PPGQTLLSAL
RAANVDVQSD CEEGLCGSCE VRVLSGKVDH RDVVLTRPER EAHNKMMACC SRACEGRLVL
EL
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