| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3587 |
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| Symbol | |
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| ID | 7970662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3789356 |
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| End bp | 3790333 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794172 |
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| Product | magnesium and cobalt transport protein CorA |
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| Protein accession | YP_002945470 |
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| Protein GI | 239816560 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0598] Mg2+ and Co2+ transporters |
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| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.677282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATCA ACTGCGTGGC CTACGAGAAC GGCGCCAAGC TTGCCGACAT TCCGGTCGAG
GACATCAGCG AGTACATCTC CCGGCCCGGC TGCTTCGTCT GGGTGGCGCT GAGCGACGCC
ACGCCGCAGG AGCTGGCCCA GATGCAGGAG GAGTTCAACC TGCATCCGCT CGCGGTGGAA
GACGCCCAGC ACGGCCACCA GCGGCCCAAG GTCGAGGAAT ACGGCGATTC GCTCTTCGTC
GTGATGCACC TGGTCGAGCC CTCTGCCGAG GGCGAGCACT GCGTGAACGT GGGCGAGGTC
GACGTCTTCG TCGGCAAGAA CTACGTGCTG TCGGTGCGCA ACCGCAGCCA GCAGGGCTTC
CTGGGCGTGC GCGAGCGCTG CGAGCGCGAG CCCGAGCTGC TGCGCAATGG CGCGGGCTTC
GTGCTGTATG CGCTGATGGA TGCGGTGGTC GACCGCTACT TTCCGGTGAT CGATGCGCTC
GAGGTGGAGC TCGAATCCAT CGAGCAGCAG ATCTTCACGC AGGGCGGTGC GGCGCGCGAC
AAGATCAAGC AGCTGTACGA CCTGAAGCGG CGCAGCATGA TCCTCAAGCG CGCGGTGGCG
CCGCTGGCCG AGGCGGCGGG CAAGCTGCAT GGCGGGCGGG TGCCGCAGAT CTGCATGAGT
TCGCAGGAAT ATTTTCGCGA CGTGGCCGAC CACCTGGTGC GTATCAACGG CTCGATCGAC
GCCATGCGCG ACACCATCGG CACGGCCATT TCGGTGAACC TCTCGATGGT CACGATCGAG
GAGAGCGAAG TCACCAAGCG GCTGGCTGCC TGGGCCAGCA TCTTTGCGGT GTGCACCGCG
TTCGCGGGCA TCTGGGGCAT GAACTTCGAG CACATGCCGG AGCTGAAATT CCGCTATGGG
TATCCGGTGG CGCTGGTGCT GATTGCGGCC ACCTGCAGCT ATCTCTACTA CCGGTTCAGG
CGCGCGGGCT GGCTCTGA
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| Protein sequence | MLINCVAYEN GAKLADIPVE DISEYISRPG CFVWVALSDA TPQELAQMQE EFNLHPLAVE
DAQHGHQRPK VEEYGDSLFV VMHLVEPSAE GEHCVNVGEV DVFVGKNYVL SVRNRSQQGF
LGVRERCERE PELLRNGAGF VLYALMDAVV DRYFPVIDAL EVELESIEQQ IFTQGGAARD
KIKQLYDLKR RSMILKRAVA PLAEAAGKLH GGRVPQICMS SQEYFRDVAD HLVRINGSID
AMRDTIGTAI SVNLSMVTIE ESEVTKRLAA WASIFAVCTA FAGIWGMNFE HMPELKFRYG
YPVALVLIAA TCSYLYYRFR RAGWL
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