Gene Vapar_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3585 
Symbol 
ID7970660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3787747 
End bp3788358 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID644794170 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_002945468 
Protein GI239816558 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.785047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACATT TCCACTTCGG CCACCACCAC TCTCACCACT GCCACTCTCC GCGCGGCGAA 
CACGAGGACG GCCTCTCGGG CGGCCGTGGC CGCCACGGCG GCGAAGAGCG CATGCACGGC 
GGAGGCCGCG GCGGACGCGG CGGCGGACGG GTGTTCGGCC ATGGCGGCCT GCGCTTCGTG 
CTGCTGCAGC TCATCGCCGA CAAGCCCGCC CATGGCTACG AGCTCATCAA GGCTATCGAA 
GACCGCCTGG GCGGCAGCTA CGCGCCCAGC CCCGGCGTGG TCTACCCCAC CCTCACGCTG 
CTCGAGGAGA TGGGCTACCT GAGCGTGGAG ATGGCCGACA CCGGCGGGCG CAAGCGCTAC 
AGCATCACCG CCAGCGGCCG GGAATTCCTG GCCGCCAACC GCGACACGGC CGACGCCATG 
ATGGCCCGCA TGAGCGGCGG CGTCGACGGC GCCGGTCCGC GCGGCGGCCG CCCGCCGCAG 
GTCACGCGCG CCATCGAGAA CCTCAAGCTC GCGATGCGCA TGCGCCTCTC GGGCACCCCC 
CTCACCGAAC AACAAGCCCA CGATTTCGCC GCGGTGCTCG ACAGCGCCGC TCAACAGCTA 
GAGCGCATCT GA
 
Protein sequence
MRHFHFGHHH SHHCHSPRGE HEDGLSGGRG RHGGEERMHG GGRGGRGGGR VFGHGGLRFV 
LLQLIADKPA HGYELIKAIE DRLGGSYAPS PGVVYPTLTL LEEMGYLSVE MADTGGRKRY 
SITASGREFL AANRDTADAM MARMSGGVDG AGPRGGRPPQ VTRAIENLKL AMRMRLSGTP 
LTEQQAHDFA AVLDSAAQQL ERI