| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3584 |
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| Symbol | |
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| ID | 7970659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3786758 |
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| End bp | 3787648 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794169 |
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| Product | Procollagen-proline dioxygenase |
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| Protein accession | YP_002945467 |
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| Protein GI | 239816557 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.654987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCG TGCTGCGCTT TTCGCCCGCG CTGAGCGACT GGGTGCTGCA CAACCTGCGC
CAGGGCTGCA CGCCCGCGCA GGTGGTGCAG GCCATGCGCA CGCAGGACAT GCCGCCTGAT
GCGGCCAAGG CCATCGTCGA CGCCTTCGTG TTCGCGCTGC GCACCGCGGG CCCCTTGCCG
ACCGATTCGG TCACGGTGGC GCCGGCCTAC CGCCACGAAG CATCGCGGCT GCCGCCGGGC
GCATCGATCC GCACCGCGGA CCGCATTGTG CGCGTGGCGG CGCGCGCGGC GCAGCCGGCC
CTCGCGGTGC TGAGCGACGT CTTCAGCGCC GAGGAATGCG AGGCGCTGAT CGCACTGGCC
CGGCCGCGGC TCGCGCCCTC GACCAGCGTC GATCCGCTGA CCGGACGCAA CCGCTTGGGG
GCACAGCGCA GCAGCCTGGG CATGTTCTTC CGGCTGCGCG AAAACGCCTT CGTCGCGCGG
CTCGACGAAC GCCTGTCCGA ACTCATGAAC CTGCCGGTGG AAAACGGCGA AGGCCTGCAG
GTGCTGCACT ACCCGGCCGG CGCGCAGAGC CTGCCGCACT TCGATTTCCT GGTGCCGTCG
AACGCCGCCA ACCAGGCCTC GCTGCAACGC AGCGGCCAGC GCGTGAGCAC GCTCGTGGCC
TACCTCAACG AGGTGGAAGA AGGCGGCGAA ACGGTGTTTC CGGAGACGGG GTGGTCGGTG
TCGCCGCAAC GCGGCGGCGC GGTGTACTTC GAGTACTGCA ACAGCCTCGG CCAGGTGGAC
CACGCATCGC TGCACGCGGG CGCGCCCGTG CTGAGCGGAG AGAAGTGGGT GGCGACCAAA
TGGATGCGGC AGCGGCGCTT CGTGGCCGCC GCCCAGGCGC CGCGCCCCTG A
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| Protein sequence | MDAVLRFSPA LSDWVLHNLR QGCTPAQVVQ AMRTQDMPPD AAKAIVDAFV FALRTAGPLP
TDSVTVAPAY RHEASRLPPG ASIRTADRIV RVAARAAQPA LAVLSDVFSA EECEALIALA
RPRLAPSTSV DPLTGRNRLG AQRSSLGMFF RLRENAFVAR LDERLSELMN LPVENGEGLQ
VLHYPAGAQS LPHFDFLVPS NAANQASLQR SGQRVSTLVA YLNEVEEGGE TVFPETGWSV
SPQRGGAVYF EYCNSLGQVD HASLHAGAPV LSGEKWVATK WMRQRRFVAA AQAPRP
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