| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3573 |
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| Symbol | |
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| ID | 7970648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3771950 |
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| End bp | 3772960 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794158 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945456 |
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| Protein GI | 239816546 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.892613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG GTTTCTCGAA GAAGAACGCC CCGGGCGCAT CGCGCCGCCT GGCCCTTGCC
GCCGCCGCCT GCGCTGCGCT TTGCCTCGCG CTCGGCAGCC CGGCCGCGCA TGCCGACGCG
GCCTACCCCG CCAAGCCGGT GAAGTTCATC ACCAACTTCC CGGCCGGCGG TCCGCTCGAC
ATCCTCGGCC GCGCGCTGGG CGACGTGCTG CAGAAGGAGC TCAGGCAGCC CTTCGTGGTC
GACAACAGGC CGGGCGCCGG CGGCAACATC GGCGCCGACC TCGTCGCCAA GAGCCCGCCC
GACGGCTACA CGGTGCTGCT GAGCATCGAC AGCACTTTCA CCATTAACCC GCACCTGTAC
GCGTCGATGC CCTTCGCGGC CAGGGACCTG AAGCCGCTGA TGATCTTCAG CTCCTCGGGC
CTGAGCTTCG GCGTCGGGCC CGCCGTGAAG GCCAGGACGC TGCCGGAATT CATCGCCCAG
GCCAAGGCCG AGCCCGCCAC CTTCAGTTCC GCCGGCAACG GCAGCCCGGG CCATCTTGCG
GCCGGCATCT TCTCGACCGC GACCGGCGCC CGGATCACGC ACGTGCCTTA CAAGGGCAAT
GCGCCGGCCG TGATGGCGCT GCTGGGCGGC GAGGTGCAGG CCGGCATCCT CGCCACGCCG
GGCCTGCTGC CGCAGGTGCA GGCCGGCAAG CTGCGCGCAC TGGCCGTGAC CGGCCGCCAG
CGCTCGCCGC TGCTGCCCGA GGTGCCCACG GTGGGCGAGC TCGGCCTGAA GGACCTGGAA
TTCGAGGTGC TCTACCTCGC AATGGTGCCG GCCGCCACGC CCGAGCCCGT GGTGCAGCTG
CTGCGCCAGT CGCTGCAGAA GGCGCTGGCG CTGCCCGAGG TCAAGGCGCG CCTCGCTTCG
CTCGACATGG TGGCGCTCGG CGAGACCGGC GCACCTGCGG CCGAGCGCCT GGCAGCCAAC
CAGGCGCGCT ACGGCCGCAT CGTCAAGGCG ACCGGGATGA AGGTGGACTG A
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| Protein sequence | MTTGFSKKNA PGASRRLALA AAACAALCLA LGSPAAHADA AYPAKPVKFI TNFPAGGPLD
ILGRALGDVL QKELRQPFVV DNRPGAGGNI GADLVAKSPP DGYTVLLSID STFTINPHLY
ASMPFAARDL KPLMIFSSSG LSFGVGPAVK ARTLPEFIAQ AKAEPATFSS AGNGSPGHLA
AGIFSTATGA RITHVPYKGN APAVMALLGG EVQAGILATP GLLPQVQAGK LRALAVTGRQ
RSPLLPEVPT VGELGLKDLE FEVLYLAMVP AATPEPVVQL LRQSLQKALA LPEVKARLAS
LDMVALGETG APAAERLAAN QARYGRIVKA TGMKVD
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