Gene Vapar_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3564 
Symbol 
ID7972676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3762394 
End bp3763164 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID644794149 
Productserine O-acetyltransferase 
Protein accessionYP_002945447 
Protein GI239816537 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTCTC GATTGCGCGC CGACATCCGG TGCATCCTCG AACGCGACCC GGCCGCGCGC 
AGCGCCTGGG AAGTGATCAC GGTCTATCCC GGCTTCCATG CCGTGGTGCT GCACCGCTGG
GCGCACGCCT GTTGGACGCA CGGCTTCAAG TGGCCGGCCC GCTTCATCGC GCACGTGGCG
CGCGGGCTCA CGGGCATCGA GATCCATCCG GCGGCCAAGA TCGGCGAGCG GGTGTTCTTC
GACCACGCAA TGGGCGTGGT GGTGGGCGAG ACCGCCGAGA TCGGCGACGG CTGCACCATC
TACCAGGGCG TGACGCTGGG CGGCACCTCG CTCTACAAGG GCACCAAGCG GCATCCGACG
TTGGGCAAGA ACGTGGTCGT GAGCGCGGGC GCCAAGGTGC TGGGCGGTTT CCTCGTCGGC
GACGGTGCGA AGATCGGCAG CAACGCGGTG GTCATCAAGC CGGTGCCGGC GGGCGCCACG
GCGGTGGGCA TTCCCGCACG CATCATCCCG TCGAAGGCCG GCGAGAGCGC CGATGTGGCC
GCGCCGCAGA AGTTCTCCGC CTACGGCATC ACGCAGGAGG ACGACCCGCT GAGCCAGGCG
ATGCGCGGGC TGATCGACAA CGCCGCAGGC CAGGAGCACC AGATCGCGCT GCTGTGGCAG
GCCATCGAGA AGCTGTCTGC GCATCCCGGC ACCAAGGACT GCGTACCCTG CGACGCGGCG
CGTGATGAGA GCTTCGAGGC GGAGAAGCTG ACGCAGCTGA TCGGGAAGTG A
 
Protein sequence
MFSRLRADIR CILERDPAAR SAWEVITVYP GFHAVVLHRW AHACWTHGFK WPARFIAHVA 
RGLTGIEIHP AAKIGERVFF DHAMGVVVGE TAEIGDGCTI YQGVTLGGTS LYKGTKRHPT
LGKNVVVSAG AKVLGGFLVG DGAKIGSNAV VIKPVPAGAT AVGIPARIIP SKAGESADVA
APQKFSAYGI TQEDDPLSQA MRGLIDNAAG QEHQIALLWQ AIEKLSAHPG TKDCVPCDAA
RDESFEAEKL TQLIGK