Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3564 |
Symbol | |
ID | 7972676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3762394 |
End bp | 3763164 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644794149 |
Product | serine O-acetyltransferase |
Protein accession | YP_002945447 |
Protein GI | 239816537 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTCTC GATTGCGCGC CGACATCCGG TGCATCCTCG AACGCGACCC GGCCGCGCGC AGCGCCTGGG AAGTGATCAC GGTCTATCCC GGCTTCCATG CCGTGGTGCT GCACCGCTGG GCGCACGCCT GTTGGACGCA CGGCTTCAAG TGGCCGGCCC GCTTCATCGC GCACGTGGCG CGCGGGCTCA CGGGCATCGA GATCCATCCG GCGGCCAAGA TCGGCGAGCG GGTGTTCTTC GACCACGCAA TGGGCGTGGT GGTGGGCGAG ACCGCCGAGA TCGGCGACGG CTGCACCATC TACCAGGGCG TGACGCTGGG CGGCACCTCG CTCTACAAGG GCACCAAGCG GCATCCGACG TTGGGCAAGA ACGTGGTCGT GAGCGCGGGC GCCAAGGTGC TGGGCGGTTT CCTCGTCGGC GACGGTGCGA AGATCGGCAG CAACGCGGTG GTCATCAAGC CGGTGCCGGC GGGCGCCACG GCGGTGGGCA TTCCCGCACG CATCATCCCG TCGAAGGCCG GCGAGAGCGC CGATGTGGCC GCGCCGCAGA AGTTCTCCGC CTACGGCATC ACGCAGGAGG ACGACCCGCT GAGCCAGGCG ATGCGCGGGC TGATCGACAA CGCCGCAGGC CAGGAGCACC AGATCGCGCT GCTGTGGCAG GCCATCGAGA AGCTGTCTGC GCATCCCGGC ACCAAGGACT GCGTACCCTG CGACGCGGCG CGTGATGAGA GCTTCGAGGC GGAGAAGCTG ACGCAGCTGA TCGGGAAGTG A
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Protein sequence | MFSRLRADIR CILERDPAAR SAWEVITVYP GFHAVVLHRW AHACWTHGFK WPARFIAHVA RGLTGIEIHP AAKIGERVFF DHAMGVVVGE TAEIGDGCTI YQGVTLGGTS LYKGTKRHPT LGKNVVVSAG AKVLGGFLVG DGAKIGSNAV VIKPVPAGAT AVGIPARIIP SKAGESADVA APQKFSAYGI TQEDDPLSQA MRGLIDNAAG QEHQIALLWQ AIEKLSAHPG TKDCVPCDAA RDESFEAEKL TQLIGK
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