| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3561 |
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| Symbol | |
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| ID | 7972187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3758040 |
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| End bp | 3759302 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794146 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_002945444 |
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| Protein GI | 239816534 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.41273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA CTTCGCTCCT GCTGCAACTC ATCGTCATCC TGAGCACCGC GCGCATCTGC
GGCTGGGTGC TGCGCCACGT GGGCCAGCCC GGTGTGGTCG GCGAAATGGC GGCGGGGCTC
ATGCTGGGGC CGGTGGTCAT GGGCGCGCTG TTCCCTTCGC TGCATGCGCA GCTTTTTTCG
AAGAGCCATC TCGAAGGCCT GTCTTCGCTC TCGACGGTGG GCCTGGTGCT CTTCATGTTC
GTGGTGGGCC TGGAGCTGCG GACCACGCAG GGCGTGCGCG CGCAGCTGAA GGCGGCGGGC
TATGTGGGCG CGCTCAGCGT CATCGTGCCG ATGGTGCTGG GGCTGGCGAT CTCGCCGGCG
CTGCATCCGG CGCTGGCGCC CGCGGGCGTG GGCTTCTGGC CGTTCGCGCT GTTCATGGCC
GCGGCGCTGT CGATCACGGC CTTTCCGGTG ATGGCGCGCA TCCTGAAGGA CCGCGGCCTC
ACGCGCACGC CCTTCGGCCA GCTGTCGCTC GGCGCCGCGG CCGTGGTCGA CGTGTTCGCC
TGGATCCTGC TGGCGCTGGT GGTGGCGCTC GCGGGGGCGG GAGAGGGCTA CGCGGGCCTT
TTGAAGACCA CGGCCGGCGT GGCCGTGCTG CTGGCCGTGC TGTTCTTCGG GCTGAAGCCG
GCCTTCGCAT GGATCCTGCG CACGCGCGCA CCCGACGGCG AACCGTCGAC CACGGTCATG
GCCTCGCTCA TGATCGGCCT CCTGGGCTGC GCGATGGTGA CCGAATGGCT GCACCTGCAT
GCCGTGTTCG GCGCCTTCCT GTTCGGCGCC TGCCTGCCGC GCGACGACCG CCTGCTGAGT
TCGCTCACCG AGCGCATCGA GCCGATCTCC ATCGTCGTGC TGATGCCGCT GTTCTTTGCG
CTGGCCGGGC TCGGCACCAC CACCCATGCC TTCTCGGGCG CGAGCATCGG CGCCATGCTG
CTGATCGTGG CGGTGGCCAC CATCGGCAAG CTGGCCGGCG GCGCCATCGG CGCGCGCATG
GCGGGCTACG GATGGCGCGA CAGCCTGGCC ACCGGTTCGC TGATGAATGC GCGCGGGCTG
ATGGAACTCA TCGTGATGAA GATCGGGCTG GATGCCGGCC TGATCGGCCC CGAGCTCTTC
ACCATGCTGC TGGTGATGGC GCTCGTCACC ACCGCGATGA CCGGGCCGCT GATCAGCCTG
GTGATGGGGC GCGCCAAGGC TCCCGCCGTG GCCGAAGAGG CCGAGGCGCG CGCCAAGCCC
TGA
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| Protein sequence | MSATSLLLQL IVILSTARIC GWVLRHVGQP GVVGEMAAGL MLGPVVMGAL FPSLHAQLFS
KSHLEGLSSL STVGLVLFMF VVGLELRTTQ GVRAQLKAAG YVGALSVIVP MVLGLAISPA
LHPALAPAGV GFWPFALFMA AALSITAFPV MARILKDRGL TRTPFGQLSL GAAAVVDVFA
WILLALVVAL AGAGEGYAGL LKTTAGVAVL LAVLFFGLKP AFAWILRTRA PDGEPSTTVM
ASLMIGLLGC AMVTEWLHLH AVFGAFLFGA CLPRDDRLLS SLTERIEPIS IVVLMPLFFA
LAGLGTTTHA FSGASIGAML LIVAVATIGK LAGGAIGARM AGYGWRDSLA TGSLMNARGL
MELIVMKIGL DAGLIGPELF TMLLVMALVT TAMTGPLISL VMGRAKAPAV AEEAEARAKP
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