Gene Vapar_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3558 
Symbol 
ID7972184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3755487 
End bp3755861 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content70% 
IMG OID644794143 
Producthypothetical protein 
Protein accessionYP_002945441 
Protein GI239816531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCT GGCTCCTGAT CTTTCTGCTG CTTGTGCTCC CGTTCCAGTT CAGCTGGGCG 
GCCTCGGCCG CCTATTGCCA GCACGAGCGC GACGCGCAGC CAGGCCACTG GGGCCATCAC
GAGCACGCAC CGGACCGCAG CGCAGACGGT TCGCGCACCG ACGATGCGCA GAAGAGCTCC
GGCACCCAGC CCAATGCCGT GCTCGGCGAT TGCGCCGCCT GCCACCTGGG GCAGGCGCAA
CACCTGCCGC CGGCGGCCGA TCGCGCGCAT GCGTCCTTGC CCGTCGGGCA GGCGCTGCGC
GCCATGCCCG CCGAGCATTT CATCTCGCAC ATCTCCGAAG TGCCCGTGCC TCCTGCGTGG
CCTCTCGCCC TTTGA
 
Protein sequence
MRRWLLIFLL LVLPFQFSWA ASAAYCQHER DAQPGHWGHH EHAPDRSADG SRTDDAQKSS 
GTQPNAVLGD CAACHLGQAQ HLPPAADRAH ASLPVGQALR AMPAEHFISH ISEVPVPPAW
PLAL