Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3558 |
Symbol | |
ID | 7972184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3755487 |
End bp | 3755861 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644794143 |
Product | hypothetical protein |
Protein accession | YP_002945441 |
Protein GI | 239816531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGCT GGCTCCTGAT CTTTCTGCTG CTTGTGCTCC CGTTCCAGTT CAGCTGGGCG GCCTCGGCCG CCTATTGCCA GCACGAGCGC GACGCGCAGC CAGGCCACTG GGGCCATCAC GAGCACGCAC CGGACCGCAG CGCAGACGGT TCGCGCACCG ACGATGCGCA GAAGAGCTCC GGCACCCAGC CCAATGCCGT GCTCGGCGAT TGCGCCGCCT GCCACCTGGG GCAGGCGCAA CACCTGCCGC CGGCGGCCGA TCGCGCGCAT GCGTCCTTGC CCGTCGGGCA GGCGCTGCGC GCCATGCCCG CCGAGCATTT CATCTCGCAC ATCTCCGAAG TGCCCGTGCC TCCTGCGTGG CCTCTCGCCC TTTGA
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Protein sequence | MRRWLLIFLL LVLPFQFSWA ASAAYCQHER DAQPGHWGHH EHAPDRSADG SRTDDAQKSS GTQPNAVLGD CAACHLGQAQ HLPPAADRAH ASLPVGQALR AMPAEHFISH ISEVPVPPAW PLAL
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