| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3552 |
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| Symbol | |
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| ID | 7972178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3746835 |
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| End bp | 3748205 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794137 |
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| Product | peptidase U62 modulator of DNA gyrase |
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| Protein accession | YP_002945435 |
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| Protein GI | 239816525 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAT CCTCCTCGCG CGCCGATTCC GGCTTCGCCT ACAGCCGCTC CTTCTTCGAA
AACCTGGTCG ACACGGCCCT GGCCCACGCC AGGAAGCTCG GTGCCACCGA TGCCGGCGCC
GAGGCCTCCG AGGGCTGCGG CCTCAGCGTC TCGGTCCGCA AGGGCGAACT CGAGAACGTG
GAGCGCAACC GCGACAAGTC GCTCGGCATC ACGGTCTACG TGGGCCACCG CCGCGGCAAC
GCCAGCACCT CCGACTTCTC CGAGGCCGCC ATCGCCCAGA CCGTGCAGGC GGCCTACGAC
ATCGCCCGCT TCACCGCCGA GGACCCGGTC AGCGGCCTTC CCGACGAGGA AGACATCGCC
AAGGAGCACC CCGAGCTCGA CCTGTTCCAT CCCTGGAGCG TGACCAGCGA AGAAGCCGCC
CGGCTCGCGC TCGAATGCGA AGAGGCGGCG CTCTCGACCG ACAAGCGCAT CACCAACAGC
GAGGGCGCAG GCGTCTCGGC CCAGCAGAGC CACTTCTTCA GCGCCCACAC GCACGGCTTC
CGCGGCGGCT ACGCGAGTTC GCGGCATTCG ATCTCGGTTG CGCCGATCGC CGGCAAGGGC
GACGACATGC AGCGCGACTC CTGGTACAGC TCCATGCGCT CGGCCGGCGA GCTGGCCAGT
CCGCAAGCCG TGGGCCGCTA TGCCGCCGAA CGGGCGCTGA GCCGGCTCAA GTCGCGCAAG
ATCAAGACCA CCGAATGCCC GGTGCTGTTC GAGTCGCCGC TGGCCGTGGG CCTGCTGGGC
GGGCTGGTGC AGGCCGTGAG CGGCGGGGCG CTGTACCGCA AGAGCACTTT CCTGCTCGAT
TCGCTCGGCA AGCCGGTGCT GCCCAGGCAC GTCGACGTGG CCGAAGACCC GCACATCCTG
CGCGGCAAGG GCAGCTCGCC CTTCGACGAC GAAGGCGTGG TGACCCGTGC ACGCAAGGTG
GTGGACGCGG GCCGGCTCGA AGGCTACTTT TTGTCGACCT ATTCCGCGCG CAAGCTGGGC
ATGAAGACCA CCGGCAACGC TGGCGGCTCG CACAACCTGA CGCTGAGCTC GCGCCTCACC
CAGCCGGGCG ACGACCTCGA CGCCATGCTC GCCAAGCTCG GCACCGGCCT CTTCGTGATC
GAGCTGATGG GGCAGGGCGT GAACTACGTG ACCGGCGACT ACTCGCGCGG CGCGAGCGGC
TTCTGGGTCG AGAAGGGCAA GATCGCCTTC CCGGTGCATG AGATCACCAT TGCCGGCAAC
CTCAAGGACA TGCTGATGGG CATCGAGGCC ATCGGCGCCG ATGCCTACAC CTTCGGCGCC
AAGACCACGG GTTCGGTGCT GGTCAACCGC ATGAAGGTGG CCGGCAGCTA G
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| Protein sequence | MTTSSSRADS GFAYSRSFFE NLVDTALAHA RKLGATDAGA EASEGCGLSV SVRKGELENV
ERNRDKSLGI TVYVGHRRGN ASTSDFSEAA IAQTVQAAYD IARFTAEDPV SGLPDEEDIA
KEHPELDLFH PWSVTSEEAA RLALECEEAA LSTDKRITNS EGAGVSAQQS HFFSAHTHGF
RGGYASSRHS ISVAPIAGKG DDMQRDSWYS SMRSAGELAS PQAVGRYAAE RALSRLKSRK
IKTTECPVLF ESPLAVGLLG GLVQAVSGGA LYRKSTFLLD SLGKPVLPRH VDVAEDPHIL
RGKGSSPFDD EGVVTRARKV VDAGRLEGYF LSTYSARKLG MKTTGNAGGS HNLTLSSRLT
QPGDDLDAML AKLGTGLFVI ELMGQGVNYV TGDYSRGASG FWVEKGKIAF PVHEITIAGN
LKDMLMGIEA IGADAYTFGA KTTGSVLVNR MKVAGS
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