| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3551 |
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| Symbol | |
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| ID | 7972177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3746024 |
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| End bp | 3746818 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794136 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_002945434 |
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| Protein GI | 239816524 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAATT CACGACGCGG CCTGCTGGCC GGCTCCGCCG CCGTGGCCGC CAGCGCCATG
GCCGGCTGCG CGCTGCCGGC CGGCGGCGCA TCGCGCCCGG CGCCCACGCC CTTCACGGTC
GCACAGGCCA CGGTGCCGAT CGTCGGCAGC GAGCAGGCGT TTCCGGTGCG CCGCATCTAC
TGCATCGGCC GCAACTATGC GGCCCATGCG CGCGAGATGG GTTCCGACCC GAGCCGCGAA
CCGCCCTTCT TCTTCCAGAA ACCGGCGGAC GCGATCCAGG TCGTCACGCC CGGCACCGTG
GCCGACCATC CGTACCCCTC GCTCACCAAG AACTACCACT ACGAGGTGGA ACTGGTGGTC
GCGCTCGGCA AGGGCGGGCG CAACATCGCG GCGGCGGATG CGCTGGACCT GGTCTACGGC
TACTCGCTCG GGCTGGACAT GACCCGGCGC GACCTGCAGC GCGAGATGGG CGACCAGAAG
AAGCCCTGGG AGATCGGCAA GAGCTTCGAC CGCTCGGCGC CGATCGGGCC GATCCATCCC
GTGGCCAAGG TCGGCCACTA CACCGACGGC GCGATCTGGC TCAAGGTGAA CGGCCAGACC
AAACAGAACG CCACGCTCAA GCACATGATC TGGTCGGTGG CCGAGCAGAT CAGCCGCCTG
TCGCAGGCCT TCGAGCTGAT GCCCGGCGAC ATCATCTATT CGGGCACGCC CGAGAACGTG
GGTCCGGTGG TGCGCGGCGA TGTGATCGAG ATCCACATCG ACGGCCTGCC GAAGCTGTCG
GTGCGCATCG TCTGA
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| Protein sequence | MSNSRRGLLA GSAAVAASAM AGCALPAGGA SRPAPTPFTV AQATVPIVGS EQAFPVRRIY
CIGRNYAAHA REMGSDPSRE PPFFFQKPAD AIQVVTPGTV ADHPYPSLTK NYHYEVELVV
ALGKGGRNIA AADALDLVYG YSLGLDMTRR DLQREMGDQK KPWEIGKSFD RSAPIGPIHP
VAKVGHYTDG AIWLKVNGQT KQNATLKHMI WSVAEQISRL SQAFELMPGD IIYSGTPENV
GPVVRGDVIE IHIDGLPKLS VRIV
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