| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3543 |
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| Symbol | |
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| ID | 7972169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3738013 |
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| End bp | 3738825 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794128 |
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| Product | protein of unknown function DUF81 |
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| Protein accession | YP_002945426 |
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| Protein GI | 239816516 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0157172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCATT TCCAGGCGCG GCCGTGGCCG GCAGACTGCG CCGCCATGAC GATTTCGAAT
GATCTTGCAG AACTGGCAAC GGGCCACTGG GCGGCGGCCA CCCTGGTGTT TCTGCTGGCC
GGCGTGGTCA AGGGCGTGAT CGGGCTCGGG CTGCCGACGG TGTCGATGGC GCTGCTTGCG
CTCTGGATGC CGCCGGTGCG CGCGGCGGCG CTGCTGATCG CGCCGTCGCT CGTCACCAAC
CTCTGGCAGA CCGGGCCGCG CGCGAGCTTC TGGCCGGTGC TGCGCCGCAT CGGCGGCATG
CAGGCGGGCA TCGTGGCGGG CACCCTGGGC GGCGCACTGT GGCTCGGCGT GCCGGCGGGC
GAAGGGGCCT CGGTGGCGCT GGGCGTGGCG CTGGTGGCTT ACGCGCTCTG GGGCCTCACG
GGACGGCAGC TGCAGGTGCC CGCGGCGCAT GAGCGCTGGC TCGGGCCGGT GGTGGGCGCC
GCCACCGGGT TGGTGACGGC GGTGACCGGC GTGTTCGTGG TGCCGGCCGT GCCCTATCTG
CAGGCCCTGG GCTTCCAGCG CGATGCGCTG ATCCAGGCGA TGGGCATTTC GTTCACCACC
TCGACCGTGG TGCTTGCCAT CGGGCTCGCG GGCAACGGCG GCTATCCGGT GGCGGCGGTG
GGGGGATCGC TCGCCATGCT GGTGCCGGCC CTCGGCGGCA TGGCGATCGG CACCTGGCTG
CGCAAGCGGC TGCCGGTGGC GGTGTTCAGG CGCTGTTTCC TGGCCGGGCT GGCGCTGCTG
GGGCTCTACA TGGTGGTTCG CGCGCTGGCG TGA
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| Protein sequence | MPHFQARPWP ADCAAMTISN DLAELATGHW AAATLVFLLA GVVKGVIGLG LPTVSMALLA
LWMPPVRAAA LLIAPSLVTN LWQTGPRASF WPVLRRIGGM QAGIVAGTLG GALWLGVPAG
EGASVALGVA LVAYALWGLT GRQLQVPAAH ERWLGPVVGA ATGLVTAVTG VFVVPAVPYL
QALGFQRDAL IQAMGISFTT STVVLAIGLA GNGGYPVAAV GGSLAMLVPA LGGMAIGTWL
RKRLPVAVFR RCFLAGLALL GLYMVVRALA
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