| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3541 |
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| Symbol | |
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| ID | 7972167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3737063 |
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| End bp | 3737515 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794126 |
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| Product | GatB/YqeY domain-containing protein |
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| Protein accession | YP_002945424 |
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| Protein GI | 239816514 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1610] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0584283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACTCA AAGAACAGAT CACCGAAGAC ATGAAGACCG CCATGCGCGC CAAGGACTCG
GAGCGCCTGG GCACCATCCG CCTGCTGCTG GCCGCGCTCA AGCAGAAGGA AGTCGACGAG
CGCGTGGAGC TCGACGATGC CATGGTCGTT GCCATCGTCG ACAAGATGGT CAAGCAGCGC
AAGGACTCGA TCGCCGCGTT CACCACCGGC GGCCGCGCCG ACCTGGCCGA CAAGGAATCG
GCCGAGATCA AGGTGCTCGA GGTCTACCTG CCGCAGCGCA TGAGCGCCGA CGAAGTGGCC
GCCGAAGTGA AGGCCATCGT GGCCGAACTG GGCGCCAAGG GCCCCGGCGA CATGGGCAAG
GTGATGGGCG CGGTCAAGAC CCGCCTCGCG GGCAAGGCCG ACATGGGCCA GGTGAGCGCC
GCCGTCAAGG CCGCCCTCGC GAACAACGCC TGA
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| Protein sequence | MTLKEQITED MKTAMRAKDS ERLGTIRLLL AALKQKEVDE RVELDDAMVV AIVDKMVKQR
KDSIAAFTTG GRADLADKES AEIKVLEVYL PQRMSADEVA AEVKAIVAEL GAKGPGDMGK
VMGAVKTRLA GKADMGQVSA AVKAALANNA
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