| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3539 |
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| Symbol | |
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| ID | 7972165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3735384 |
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| End bp | 3736592 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794124 |
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| Product | HI0933 family protein |
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| Protein accession | YP_002945422 |
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| Protein GI | 239816512 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.110532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGTGG TTGGCGCGGG CGCGGCCGGG CTGTTCTGCG CGGGCCTGGC CGGCCAGCGC
GGGCTCAAGG TGCTGCTGGT CGACCACAGC GAAAAGATCG CGGAAAAAAT CCGCATCTCG
GGCGGCGGCC GCGCCAACTT CACCAACCGC GACCTCGACG TGCGCGCGCC GCAGCGCCAC
TTCATCGGCG ACAACCCGAA TTTCTGCCGC TCGGCGCTGT CGCGCTATGC GCCGCAGCAG
TTCATCGACC TGGTGCACAA GCACGGCATT GCGTATCACG AAAAGCACAA GGGCCAGCTG
TTCTGCGACG GCTCCTCGCA GCAGATCATC GACATGCTGC TGGCGGAGTG CGAGGCCGGC
GGCGTCACGC GCTGGCAGCC GTGCAAGCTC GGAAAGATCG TGTTCTCGGC CGCCGGCGAC
GGCGCATCGG GCGCAGGCAG CTACCGGATC GATAGCACCC GGGGTCCCAT CGAGACGCCC
AGGCTGGTGG TCGCCACCGG CGGCCTGTCG ATTCCGCAGA TCGGCGCCAG CGACTTCGGC
TACCGCCTGG CCGAGCAGTT CGGCCTGCGC GTCGTCACGC CGCGCCCGGC GCTGGTGCCG
CTGACCTTCG GCGGCGAGGC CTGGGCACCG TATGCCGAAC TGGCCGGGCT GGCGCTGCCG
GTGCGCATCG AGACCGGCGC CAGGAAGGAA AAGATGGCCT TCCTCGAGGA CCTGCTGTTC
ACCCACCGCG GCCTGTCGGG CCCAGCGGTG CTGCAGATTT CGAGCTACTG GAAGCCCGGC
AGCCCGCTCA CGCTCGACTT CGCGCCGGGC GTGGACGTGG CCGAGGCCCT GGGCGAAGCC
AAGCTGCGCT CGAAGAAGCG CATCGCCAAC GAGCTGGCCG CGCTGGTGCC CTCCCGGCTG
GCGGATGCCT GGGTCGGGCA GGATCCGGCG CTGCAGCGGC CTGTCAACGA GGCGGCCGAC
AAGGCGCTGG CCGCCCTGGC GGAGCGCATT GCCCGCTGGC AGATCACCCC CAGCGGCACC
GAGGGCTACA AGAAGGCCGA AGTCACGGCC GGCGGCGTCG ACACCCGCGA CCTGTCCTCC
CAGACCATGG AATCGAAGCA GCCGGGCCTG TATTTCATCG GCGAAGTGGT CGATGTGACG
GGCTGGCTGG GCGGATACAA CTTCCAGTGG GCCTGGGCCA GCGCGCACGC CTGCGCCACC
TCCTTCTGA
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| Protein sequence | MVVVGAGAAG LFCAGLAGQR GLKVLLVDHS EKIAEKIRIS GGGRANFTNR DLDVRAPQRH
FIGDNPNFCR SALSRYAPQQ FIDLVHKHGI AYHEKHKGQL FCDGSSQQII DMLLAECEAG
GVTRWQPCKL GKIVFSAAGD GASGAGSYRI DSTRGPIETP RLVVATGGLS IPQIGASDFG
YRLAEQFGLR VVTPRPALVP LTFGGEAWAP YAELAGLALP VRIETGARKE KMAFLEDLLF
THRGLSGPAV LQISSYWKPG SPLTLDFAPG VDVAEALGEA KLRSKKRIAN ELAALVPSRL
ADAWVGQDPA LQRPVNEAAD KALAALAERI ARWQITPSGT EGYKKAEVTA GGVDTRDLSS
QTMESKQPGL YFIGEVVDVT GWLGGYNFQW AWASAHACAT SF
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