| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3537 |
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| Symbol | |
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| ID | 7972163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3733433 |
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| End bp | 3734563 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794122 |
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| Product | fatty acid hydroxylase |
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| Protein accession | YP_002945420 |
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| Protein GI | 239816510 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.351469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACA TCGACAAACT CAACGAATTC ACACAGAACC ATGGCGAGCT GCAGCGCGGC
CGCGGCCTCG TCACCGGAAC CATCGCCCTG AGCCTGGGCA TCCTGTGCTT CCTTGGCGTG
CTGGCCTTCC ACTTTCCGCA GTACCTCACG ACGCCCGAGC TGCGCAAGAG CTACAACGTC
GACGTGATGC GCTTCATCCT GCTGGCGGCC ATGGTGGTCT CGGGCGGGCT GGCGCTGGTG
AACATCATCT TCAACCGCTC GCGCTGGCTG TCTTCGGCCG CCTTCCTGCT GGTGGCCGCG
GCCGCGCTGC TGGGCGGGCA CAAGGTGCCG GTGAACGACT TTGCCGACAA CACGCCCTAC
ATCGGCCTGG ACTGGTTCAT CCTGGATCTG CTGGGCTCCT CGCTGATCTT CATCTTCATC
GAGAAGCTGT TTGCGCTGCG CAAGGACCAG CCGGTGTTCC GCGCCGAATG GCAGACCGAC
TTCCACCATT TCGTGGTCAA CCACATGATC GTGGGCTTCG TGCTGCTGGC CACCAACCTG
ATGGTGCACA AGTTCTTCGG CTGGGCCGCC AACGACGGCG TGCGCGGCTG GGTGGGCAAC
CTGCCGTTCT GGGCCGGGCT GCTGCTGATC GTCCTGGTGG CCGACCTGGT GCAGTACTGG
ACCCATCGCG CCTACCACGA GGTGCCGGTG CTGTGGCGCC TGCATGCGGT GCACCACAGC
GTGAAGAGCA TGGACTGGAT GGCCGGCTCG CGCCAGCACA TCCTCGAGCT GCTGATCACG
CGCACGCTGG TGCTGGCGCC GATCTATGTG CTGGGCTTTT CCAAGGAAGT GATCGACGCG
TACATCGTGG TGGTGGGCTT CCAGGCGGTG TTCAACCACT GCAACGTGAG CGTGCGGCTC
GGGCCGCTGC GCTACATCAT CGTCACGCCC AACTTCCACC ACTGGCACCA CAGCCAGGAC
GTGGAAGCGC TCGACAAGAA CTATTCGGCG CACTACGCCT TTCTCGACTA TCTCTTCGGC
ACCGCCGTGA AAAGCACCAA GCTCTGGCCC GAGAAATACG GCGTGCTCGG CGACTACGTG
CCCAACGGCT TCTTCAAGCA GTTGAAGTTT CCTTTCGTCT GGAAGGGATG A
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| Protein sequence | MLDIDKLNEF TQNHGELQRG RGLVTGTIAL SLGILCFLGV LAFHFPQYLT TPELRKSYNV
DVMRFILLAA MVVSGGLALV NIIFNRSRWL SSAAFLLVAA AALLGGHKVP VNDFADNTPY
IGLDWFILDL LGSSLIFIFI EKLFALRKDQ PVFRAEWQTD FHHFVVNHMI VGFVLLATNL
MVHKFFGWAA NDGVRGWVGN LPFWAGLLLI VLVADLVQYW THRAYHEVPV LWRLHAVHHS
VKSMDWMAGS RQHILELLIT RTLVLAPIYV LGFSKEVIDA YIVVVGFQAV FNHCNVSVRL
GPLRYIIVTP NFHHWHHSQD VEALDKNYSA HYAFLDYLFG TAVKSTKLWP EKYGVLGDYV
PNGFFKQLKF PFVWKG
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