| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3530 |
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| Symbol | |
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| ID | 7972156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3724004 |
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| End bp | 3726799 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794115 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_002945413 |
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| Protein GI | 239816503 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGA CTCGCTCCAC CTGCCCCTAT TGCGGCGTCG GCTGCGGCGT CGTCATCGAA
TCCGATGGCG CCCAGATCAC CGGCGTGCGC GGCGACCCCG ATCACCCCGC GAATTTCGGG
CGCCTGTGCA CCAAGGGCTC GACGCTGCAC CTCACGGCGA CAGCCACGGT GACGCGGCAG
ACGCGGCTGC TGCAGCCGAT GCGGCGCGCC GAGCGCGGCG CCACGCCCGA AGCCATCGGC
TGGGACGGCG CGCTCGACAT GGCGACGGAC AAGTTCGCCC AGGTCATTCG CGACCACGGC
CCCGACGCCG TGGGCTTCTA TGTCTCGGGC CAGCTGCTCA CGGAGGACTA CTACGTCTTC
AACAAGCTCG CCAAAGGCCT CATCGGCACC AACAACATCG ACACCAACTC GCGCCTGTGC
ATGAGCAGCG CGGTGGCCGG CTACAAGCAG ACGCTGGGCG CCGATGCGCC GCCCGCCTGC
TACGACGACC TCAAGCATGC GCAATGCCTT TTCATCGTGG GCAGCAACGC CGCGTGGGCG
CATCCGATCC TGTTCCGGCG TATCGAGGAT GCGAAGGCCG CGAACCCGGG GCTCAAGATC
ATCGTGGCCG ATCCGCGCCG CACCGACACG GTCGAGATCG CCGACCTGTT CCTGCCGATC
CAGCCAGGCA CCGACGTCAT GCTGTTCAAC GGCATGCTGC ACCTGATGCT GTGGGAAGGC
TGGACCGACA ACGGCTACAT CGCCGCCCAC ACCAGCGGCT TCGATGCATT GAAGACCACG
GTGCGCGAAT GCACGCCCGA CAAGGTGGCG CAGATCTGCG GCATCTCGAA AGAAGACCTG
CTCGCCGCGG CGCGCCTGTT CGCGACCTCG CCGGCCACGC TGAGCCTCTA TTGCCAGGGC
CTCAACCAGT CGTCGAGCGG CACCGCCAAG AACGCGGCGC TGATCAACCT GCACCTGGCC
ACCGGCCAGA TCGGCAAGCC CGGCGCCGGC CCGTTCTCGC TCACGGGCCA GCCCAATGCG
ATGGGCGGGC GCGAAGTGGG CGGCCTGGCC AACCTCTTGA GCGCGCACCG CGACCTGGCC
AATCCCGCGC ACCGGGCCGA AGTGGCGGCG CTGTGGAATG TGCCCTCGGT GCCCGAAAAG
CCCGGCAAGA CCGCGGTCGA GATGTTCCAG GCCGCGGCCG ACGGCGAGAT CCGCGCGCTG
TGGATCGCCT GCACCAACCC TGCCCAGTCG ATGCCCGACC AGGCCACGGT GCGCCGCGCC
CTCGAGCGCG CCGAGTTCGT GGTGGTGCAG GAAGCCTTTT CGACCACCGC CACCTGCGCC
TTCGCCGACC TGCTGCTGCC CGCAACCACC TGGGGCGAGA AGGAAGGCAC CGTGACCAAC
AGCGAGCGCC GCATCTCGCG CGTGCGCCCC GCGGTGGCGG CGCCCGGCGA GGCACGGCAC
GACTGGTCGA TTGCCGTGGA CTTCGCGCGC CGGCTCGAAC AGCGGCTCGG CGCCACGCCC
ACGCTGTTTC CCTACGAGAC CGCCGAGTCG GTCTGGAACG AGCACCGCGA ATCCACGCGC
GGCCGCGACC TCGACATCAC CGGCATGAGC TACGCGATGC TCGACAGCGC GGGACCGCAG
CAATGGCCGC TGAAGGAAGG CGAGGCCACC GGCCGCGCAC GCCTCTACGA AGACGGCATC
TTCCCCACGC CGGACGGCCG CGCGCGCTTT GTCGACACCG TCTACAAGCC GGTGGCCGAG
GCGCGCGAGG CGCGCTATCC GTTCTCGCTC AACACGGGGC GCCTGCGTGA CCAGTGGCAC
GGCATGAGCC GCACCGGCAC CGTCGGCCGC CTGTTCGGCC ACGTGGCCGA GCCGCTCGTG
CAGATGAATG CGCAGGACAT GGCGCGCCGC CAGCTGAAGG ACGGCGACCT CGTGCACCTG
ACCTCCAAGC GCGGCTCGAT CCTGATGCCT GTGCAGGCCA GCGCCGAGAT CGGCCTGAGC
CAGGCCTTCG TCGCCATGCA CTGGGGCGAG GAATACCTGA GCGGCTGCTC GTCGACCGGC
ACGCCGCTCG CGGGCATCAA TGCGCTGACC ACCTCGGCCT ACTGCCCCAC CTCGAAGCAG
CCCGAGCTCA AGCACACGCC GGTCAAGATC CTCAAGGCCG AGCTGCCCTG GTCGCTCCTG
GCCATGGCCT GGCTGCCGCC CGACGCGGCG CTGGCCGCGC ACCAGGCGCT CAAGCCGATG
ATGGCGATGT TTCCGTTTGC CACCTGCGTG CCGTTCTCGG GCAACACGCC GGGCGAGGAA
CGCAGCGGCA TCCTGTTCCG CGCCGCCGCG CACGATGCGC CGGCCGACGA AACCATCGAC
CGCATCGAAG GCCTGCTCGG CCTGCGCGGC AGCGATGCCC TGCGCTACGC CGACCGCCGG
CGCGGCCAGC GCCGCGTGGC GCGGCTGGTG CGGCGCGCCG ACGGCAACGC CGGCCTCGAA
GCCTTCCTGC TGGGCGGCGA CACCAGCGCC GAGGCCTGGA TCGGCACCCT GCTGCGCGAG
GAGATTCCGG CGCAGAGCTA CGGCCGGCTG CTGCTGTCGC CGGGCGCGCG CGCGCCGGTG
GCGGTGCAGT CGCGCGGACA TCCGGTCTGC ACCTGCTTCA ACGTGACCGA CCTGGCGATC
CAGGCCGAAC TGGGCCGCTG CACCGGCACG CCCGACGAGC GCCTGGCCGC GCTGCAGGGT
GCGCTCAAAT GCGGCACCAA CTGCGGCTCC TGCCTGCCCG AGCTCAAGCG CATGGTGCGC
GCAACGCCCG CCGAGACCGT GGCCGAGGGT GCATAA
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| Protein sequence | MAETRSTCPY CGVGCGVVIE SDGAQITGVR GDPDHPANFG RLCTKGSTLH LTATATVTRQ
TRLLQPMRRA ERGATPEAIG WDGALDMATD KFAQVIRDHG PDAVGFYVSG QLLTEDYYVF
NKLAKGLIGT NNIDTNSRLC MSSAVAGYKQ TLGADAPPAC YDDLKHAQCL FIVGSNAAWA
HPILFRRIED AKAANPGLKI IVADPRRTDT VEIADLFLPI QPGTDVMLFN GMLHLMLWEG
WTDNGYIAAH TSGFDALKTT VRECTPDKVA QICGISKEDL LAAARLFATS PATLSLYCQG
LNQSSSGTAK NAALINLHLA TGQIGKPGAG PFSLTGQPNA MGGREVGGLA NLLSAHRDLA
NPAHRAEVAA LWNVPSVPEK PGKTAVEMFQ AAADGEIRAL WIACTNPAQS MPDQATVRRA
LERAEFVVVQ EAFSTTATCA FADLLLPATT WGEKEGTVTN SERRISRVRP AVAAPGEARH
DWSIAVDFAR RLEQRLGATP TLFPYETAES VWNEHRESTR GRDLDITGMS YAMLDSAGPQ
QWPLKEGEAT GRARLYEDGI FPTPDGRARF VDTVYKPVAE AREARYPFSL NTGRLRDQWH
GMSRTGTVGR LFGHVAEPLV QMNAQDMARR QLKDGDLVHL TSKRGSILMP VQASAEIGLS
QAFVAMHWGE EYLSGCSSTG TPLAGINALT TSAYCPTSKQ PELKHTPVKI LKAELPWSLL
AMAWLPPDAA LAAHQALKPM MAMFPFATCV PFSGNTPGEE RSGILFRAAA HDAPADETID
RIEGLLGLRG SDALRYADRR RGQRRVARLV RRADGNAGLE AFLLGGDTSA EAWIGTLLRE
EIPAQSYGRL LLSPGARAPV AVQSRGHPVC TCFNVTDLAI QAELGRCTGT PDERLAALQG
ALKCGTNCGS CLPELKRMVR ATPAETVAEG A
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