| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3527 |
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| Symbol | |
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| ID | 7972153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3719267 |
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| End bp | 3720967 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794112 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_002945410 |
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| Protein GI | 239816500 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTG AAGTGGACAT CGGCTACAGC AGCCAGCGCG GACCGCGCGA CGTGAACGAA
GACTTCGCGG GCGCCGTGAA CGCGCCGCCT GGCGACGAGT CGCGCGGGCT CATCGCGGCC
ATTGCCGACG GCGTGTCCAC GGGCGGGCGC GGCCTGGAGG CGGCGCAGAC CACCGTCATG
GGCCTCTTGG CCGACTACTT CGCGACGCCC GATACCTGGG AGCCGACTGC CGCGCTCGAC
CGCCTGGTCG CCGCGCAGAA CGCCTGGCTC GCCGACCACA ACCGGCGGCG GCAGGGCAGC
GCCACGGCGC TCACCACGCT GACGGCGCTG GTGCTGCACG GCCAGAGCTA CACGCTCGCG
CATGTGGGCG ACACGCGCGC CTGGCGCGTG CGCGCCGGCG GCGAGCCGGC CATGCCGCTG
ACCCAGGACC ACGCCTTCGA GCATCCCGAC ATGCGCAGCC GGCTGACGCG CGCCATCGGC
CTGGACGACC AGGTGCGCGT CGACTATGCG CAGGGCGACG TGCGCGTGGG CGATTGCTTC
GTGCTCAGCA CCGATGGCGT GCACGGCGTG CTCAAGCCGC AGCGCCTGGC CGCGCTCGCC
CTGCAGGGCA GTGCCGAGGA GGCGAGCGAG GCGCTGGTGC AGGCGGCGCT GGACGCAGGC
ACGCGCGACA ACGCGACCGC ATTGGTCATC CGCGTCGTCG GCCTCGATGT GCGGCAGCTG
GACGACGAAC TCGGCGACGG CCGCCGCCTG GCGCCGCCGC CCTTGTTGAA GGTGGGAGAC
GCGCTCGACG GCTACGTCGT CACCGCGCTG GTGGCCGACA CCGGCGTGCA CCTGCTGTAC
CAGGCGCGCA ATGCGGCCAC GCGCGAACTG GTGGCGCTCA AGACGCTGCA TCCCTCGCGC
GCCAGCGACC CGCAGGAGCG CGCGATGCTC GCGCACGAAG CCTGGCTGGG CCAGCGCGTG
GGCAACAGCG GATTCGTGCG CGTGCACGAA CGCGCCGAGA ACGCCAGCGC GCTCTACATC
GTGTTCGACT GGCACGGCGG GCGCACGCTG GAGCAGATGC GCAAGTCCGG CGCGCGCGGC
ACAGTGGCCG AAGTGGTTGC CGCGGCCATC GAAGTGACCA AGGCCCTGGG CCGGCTGCAT
CGCCATGGCG TGGTGCACCG CGACATCAAG CCCGGCAACC TGCACCTGGG CGACGATGGC
CGCTGGCGCA TCCTCGACCT GGGCGTGGCG CTGTCGGGCC GCGAAGGCGC GGCCCAGCGG
GAGCTGCGTG CCGGCACGCC GAGCTACATC AACCCTGAGC AGTGGGAGGG CGCCGAGGCC
GACACCGCGA GCGACCTGTT CGCGCTCGGC GTCACGCTGT ACCAGTGGCT CGGCGGCCAT
CTGCCCTACG GCGAGATCGA GCCCTACCAG GTGGCGCGCT ACCGGCGCGA TCCGGCCGCG
CTCTCGCGCC TGCGGCCCGA TGTGCCCGTG TGGCTCGACC ACCTGGTGCG CAAGGCGGTC
GCGCGCGATC CGCGCGAGCG CTTCGAAACC GCCGAGGAAA TGCTGCTCGC GCTGGAGCGC
GGCGCTTCCC GCCCCGTGAG CGCGCCCGCC GCCACGCCGC TGATCCGCCG CGACCCGGCC
GCGCTCTACA AGATCGCGCT GGCCGTGTCG CTGCTGTTCA ACGCACTGCT GGTGGTGTGG
CTGCTGTTCC TGCCACGTTG A
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| Protein sequence | MSFEVDIGYS SQRGPRDVNE DFAGAVNAPP GDESRGLIAA IADGVSTGGR GLEAAQTTVM
GLLADYFATP DTWEPTAALD RLVAAQNAWL ADHNRRRQGS ATALTTLTAL VLHGQSYTLA
HVGDTRAWRV RAGGEPAMPL TQDHAFEHPD MRSRLTRAIG LDDQVRVDYA QGDVRVGDCF
VLSTDGVHGV LKPQRLAALA LQGSAEEASE ALVQAALDAG TRDNATALVI RVVGLDVRQL
DDELGDGRRL APPPLLKVGD ALDGYVVTAL VADTGVHLLY QARNAATREL VALKTLHPSR
ASDPQERAML AHEAWLGQRV GNSGFVRVHE RAENASALYI VFDWHGGRTL EQMRKSGARG
TVAEVVAAAI EVTKALGRLH RHGVVHRDIK PGNLHLGDDG RWRILDLGVA LSGREGAAQR
ELRAGTPSYI NPEQWEGAEA DTASDLFALG VTLYQWLGGH LPYGEIEPYQ VARYRRDPAA
LSRLRPDVPV WLDHLVRKAV ARDPRERFET AEEMLLALER GASRPVSAPA ATPLIRRDPA
ALYKIALAVS LLFNALLVVW LLFLPR
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