| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3526 |
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| Symbol | |
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| ID | 7972152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3717984 |
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| End bp | 3719249 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794111 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002945409 |
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| Protein GI | 239816499 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCT TCAAGACCTT TCTGCATTCC GGCCACGGGC CGACGCTGTT TGCGTCCTTC
CTGTACTTCT CGTTCTCGTG CTGCATCTGG GTGCTCAACG GTGCGATGGC GCCCTTCATC
GGCGAGAGCT TCGACCTCTC GCCCGCGCAG AAGGGGCTGA TGCTGTCGGT GCCCATCATC
GCGGGCGCGC TGATGCGCTT TCCGCTCGGC ATCCTGTCGC AGTACATCGG CCGCAAGAAC
GCGACGCTGG TCGAGATGGG CCTGATCGCG GTGGCGATGC TGTTCGGTTT CTTCTTCGTG
AAGAGCTTCA ACGACCTGCT CGCCATGGGC GTGCTGCTGG GCATTGCGGG CGCGAGCTTC
GGCGTGGCGC TGTCGCTGGG CTCGGGCTGG TTCCCGCCGC AGCACAAGGG CCTGGCAATG
GGCCTGGTGG GCGCCGGCAA CGTGGGCACG GCGGTGTCGG TGCTGGTGGC GCCGCCGCTC
GCGCAGTGGC TCGGCTGGCA GGCGGTGTAC GGCGTGGCGG CCGGCGCAAT CCTCGTGCCG
ATGATCGTGA TGATCGTGTT CGCCAAGGAG CCGCCCGACG TCGACAGCCA TGCGAGCTTC
CGCGCGCACA TCGCCTGCCT GTTCGAGAAG GACGGCTGGG TGTTCAGCCT GATCTACGGC
GTGACCTTCG GCGGCTTCAT CGGGCTCACC ACCTTCCTGC CTTCCTACTA CTACGACCAG
TTCGGCGTGA GCAAGGTGCA GGCCGGCCAG CTCACGATGC TGGCCGCCTT CATGGGCGCG
GCGGTTCGCA TCGTGGGCGG CTGGATCTCC GACCGCTGGG GCGGCGTCAA CACGCTGACC
GTGGTGCTGC TGGTGGTGGC CGTCGGGCTG GTGCTGGTGG GCATCTCGTC GGGCTCGCTC
GCGCTCACCA CCCTGCTGCT GATCCTGTGC TTTGCCGCGC TGGGCGCAGG CAACGGCGCG
CTGTTCCAGT TGGTGCCGCT GCGCTGGCCC ACGAGCACCG CGGTGGCCGG CTCGATGATC
GGCGAGATCG GCGCGCTGGG CGGCGGGCTG GTGCCCAACG CCATGGGCCT GTCGAAGCAG
TACCTGGGCA GCTACGTCTG GGGCTTTGTG TTCTTCGGTG CGCTGTCGCT GGTGATGCTG
GGCGTCATGC GCGTGATGCA GATCCGCTGG ACGCGCACCT GGGCAGAGAA AGGTGGCCGC
GCGCGCACCT CGCCCCACGC TGCCGACGCC AAGTACGTGC CTCCAAGGAA GACGGCGCGG
CCATGA
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| Protein sequence | MSSFKTFLHS GHGPTLFASF LYFSFSCCIW VLNGAMAPFI GESFDLSPAQ KGLMLSVPII
AGALMRFPLG ILSQYIGRKN ATLVEMGLIA VAMLFGFFFV KSFNDLLAMG VLLGIAGASF
GVALSLGSGW FPPQHKGLAM GLVGAGNVGT AVSVLVAPPL AQWLGWQAVY GVAAGAILVP
MIVMIVFAKE PPDVDSHASF RAHIACLFEK DGWVFSLIYG VTFGGFIGLT TFLPSYYYDQ
FGVSKVQAGQ LTMLAAFMGA AVRIVGGWIS DRWGGVNTLT VVLLVVAVGL VLVGISSGSL
ALTTLLLILC FAALGAGNGA LFQLVPLRWP TSTAVAGSMI GEIGALGGGL VPNAMGLSKQ
YLGSYVWGFV FFGALSLVML GVMRVMQIRW TRTWAEKGGR ARTSPHAADA KYVPPRKTAR
P
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