| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3515 |
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| Symbol | rpsO |
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| ID | 7972141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3706316 |
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| End bp | 3706582 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794100 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | YP_002945398 |
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| Protein GI | 239816488 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGCAG CCTCCATCAA GGCCGAAGTC GTCAAGGACA ACGCCCGCGC CGCCAACGAC
ACCGGCAGCC CCGAAGTGCA AGTCGCACTG CTGACCGCCC GTATCAACGA GCTCACCCCC
CACTTCAAGA CGCACGCCAA GGACCACCAC GGCCGTCGCG GCCTGCTGCG CATGGTGAGC
CGCCGCCGCA AGCTCCTGGA CTACCTCAAG TCCAAGGATG CCGACCGCTA CACCGCGCTG
ATCGCCAAGC TGGGTCTGCG CAAGTAA
|
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| Protein sequence | MIAASIKAEV VKDNARAAND TGSPEVQVAL LTARINELTP HFKTHAKDHH GRRGLLRMVS
RRRKLLDYLK SKDADRYTAL IAKLGLRK
|
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