| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3508 |
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| Symbol | |
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| ID | 7972133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3699707 |
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| End bp | 3700318 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794092 |
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| Product | NADH (or F420H2) dehydrogenase, subunit C |
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| Protein accession | YP_002945391 |
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| Protein GI | 239816481 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATT TTGCAATTTC GCCGGAGGTG CTGCGCGCCA CCATTGCCGA GACGCTTGGC
GCTCGCGCCA AGAGCGTGAC GCTCGCACTG GGCGAGGTAA CCGTAGTGGT TGCTGCCGAC
GCCTACATCG AGGCGGCCAT GCTGCTGCGC GATGCGCCCG GCTGCCGCTT CGAGCAGCTG
ATCGACCTCT GCGGCATGGA CTACTCCGAC TACCGCGAAG GCGAGTGGCA AGGCGAGCGC
TATGGCGTCG TCACGCACCT GCTGTCGGTG AGCCTCAACC AGCGCGTGCG CCTCAAGGTG
TTTGCGCCGA ACGAAGACCT GCCCGTGGTC GACTCGCTCC AGCCCGTGTG GAACGCCGCC
ACATGGTTCG AGCGCGAAGC CTTCGACCTC TACGGCATCG TGTTCGAAGG CCACGACGAC
CTGCGCCGCA TCCTGACCGA CTACGGCTTC ATCGGCCATC CGTTCCGCAA GGACTTCCCG
GTGTCGGGCC ACGTCGAGAT GCGCTACGAC GAAGAGCAGA AGCGCGTGGT CTACCAGCCG
GTATCGATCG AGCCCCGCGA AATCACGCCG CGCGTGATCC GCGAAGACAA CTACGGCAGC
GGTTTGCACT GA
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| Protein sequence | MTDFAISPEV LRATIAETLG ARAKSVTLAL GEVTVVVAAD AYIEAAMLLR DAPGCRFEQL
IDLCGMDYSD YREGEWQGER YGVVTHLLSV SLNQRVRLKV FAPNEDLPVV DSLQPVWNAA
TWFEREAFDL YGIVFEGHDD LRRILTDYGF IGHPFRKDFP VSGHVEMRYD EEQKRVVYQP
VSIEPREITP RVIREDNYGS GLH
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