| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3506 |
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| Symbol | |
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| ID | 7972131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3697893 |
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| End bp | 3698441 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794090 |
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| Product | NADH-quinone oxidoreductase, E subunit |
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| Protein accession | YP_002945389 |
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| Protein GI | 239816479 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACTT CCTCGACCCA CCATGACACG GCGCCCTCGG CGCCTTCTGC TCCTCTGAAG
CCCGCGATTC TCGAGCGCTT TGCGCGCGAG GTCGCCAAGT ACCCCGAAGC CGGCAAGCAG
TCGGCCGTGA TGGCCTGCCT GGCCATCGTG CAGCAGGACG AAGGCTTCAT CAGCATGCAG
CGCGAGCGCG AGATTGCCGA GTACCTCGGC ATGGCGCCGA TCGCCGTGCA CGAGGTCACG
ACCTTCTACA ACATGTACAA CCAGCATCCG GTGGGCAAGT TCAAGCTCAA CGTTTGCACC
AACCTGCCGT GCCAGCTGCG CGACGGCGTC ACCGCGCTGG TCCACCTCGA GAAGAAGCTC
GGCATCAAGA TGGGCGAGAC CACGGCCGAC GGCATGTTCA CGCTGCAGCA GAGCGAATGC
CTGGGCGCCT GCGCCGATTC GCCCGTGATG CTGGTCAACG ACCGCACCAT GTGCAGCTTC
ATGAGCAACG AGAAGCTCGA CCAGCTCATC GACGGGCTGC GTGCTTCCAC CAAAGGGGAG
GCCGCCTGA
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| Protein sequence | MTTSSTHHDT APSAPSAPLK PAILERFARE VAKYPEAGKQ SAVMACLAIV QQDEGFISMQ
REREIAEYLG MAPIAVHEVT TFYNMYNQHP VGKFKLNVCT NLPCQLRDGV TALVHLEKKL
GIKMGETTAD GMFTLQQSEC LGACADSPVM LVNDRTMCSF MSNEKLDQLI DGLRASTKGE
AA
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