| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3497 |
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| Symbol | |
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| ID | 7972122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3686601 |
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| End bp | 3688088 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794081 |
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| Product | NADH dehydrogenase subunit N |
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| Protein accession | YP_002945380 |
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| Protein GI | 239816470 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
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| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.210708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACA AACTCAGCTG GGTCGCGATC TACCCCGAAA TCGTGCTGCT GGTCATGGCC
TGCATCATTG CGCTGGTCGA CCTGTCGAGC ACCAGTGCGC AGCGCACGCG CACCTACATC
CTGACGCTGC TCACGCTGGC CGTGGTGGCC GTGCTCACGG GCCTTGCCGC CAACGACGGC
AAGACGGTCT ACGGCTTCGG CGGCATGGTC GTGAGCGATC CCATGGGCAA CTGGCTCAAG
TGCTTTGCCA CGGTGGCCCT GATGGTCACG CTGGTCTACG GACGGCCCTA TGCGGCGGAC
CGCGACATGC TGCGCGGCGG CGAGATGTTC ACCATCGGCA TGTTCGCGCT GCTGGGCATG
TTCGTGATGA TCTCGGGCAG CAACTTCCTC TTGATCTACC TGGGCCTCGA ACTGCTCACG
CTGTCGAGCT ATGCGCTGGT GGCGCTGCGC CGCGACAACG CGGTGGCCAG CGAAGCGGCC
ATGAAGTATT TCGTGCTCGG CGCCATGGCC AGCGGCTTCC TGCTCTATGG CCTGTCGATG
CTGTACGGCG CGACCGGTTC GCTCGACACC AACGAAGTGT TCAAGATCAT CGCGAGCGGC
AAGGTGAACC ACCAGGTGCT GGTGTTCGGC CTGGTGTTCA TCGTGGCGGG CCTGGCCTTC
AAGGTGGGGG CGGCGCCTTT CCACATGTGG GTGCCCGACG TCTACCAGGG CGCCCCGACG
GCGGTCACGC TGCTGATCGG CGCGGCGCCC GAGCTGGCCG CCTTTGCCAT CATCATCCGC
CTGCTGGTGG AAGGGCTGCT GCCGCTGGCC ATCGACTGGC AGCAAATGCT GGCGCTCCTG
GCCATCGCCT CGCTGCTGGT GGGCAACCTG GCCGCCATCG CGCAGACCAA CCTCAAGCGC
ATGCTGGCCT ACTCGACCAT TGCGCAGATG GGCTTCATGC TGCTCGGCCT GGTGGCGGGC
GTGGTCAACG GCAACACCTA CAACGCACAG TTCGCCTACA GCGCCTCGAT GTTCTACATC
GTGACCTACG TGCTGACCAC GCTGGCGAGC TTCGGCATCA TCCTGCTGCT GGCGCGCGAG
GGTTTCGAAA GCGAAGAGAT CACCGACCTG GCCGGCCTGA ACCAGCGCAG CCCGCTGTAC
GCCGGCGTGA TGGCCATCGC GATGTTCTCG CTCGCGGGCC TGCCGCCGCT GGTCGGTTTC
TACGCCAAGC TGGCGGTGCT GCAGGCGCTG ATCGCCTCGG GCCAGGCGCT CTACATCGGC
CTGGCGGTGT TTGCGGTGGT CATGTCGCTG ATCGGCGCCT TCTACTACCT GCGTGTGGTC
AAGGTCATGT ACTTCGACGC TCCGGTCACG GCCAGCACCG TGTCGGCGCC GCGCGACGTG
CGCACCGTGC TGTCGATCAA TGGCCTGCTG ATCCTCGTGC TGGGCATCGT GCCCGGCGGC
CTCATGACGC TGTGCGCCAA GGCCATCGTG GCCACGCTGG CGAACTGA
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| Protein sequence | MIDKLSWVAI YPEIVLLVMA CIIALVDLSS TSAQRTRTYI LTLLTLAVVA VLTGLAANDG
KTVYGFGGMV VSDPMGNWLK CFATVALMVT LVYGRPYAAD RDMLRGGEMF TIGMFALLGM
FVMISGSNFL LIYLGLELLT LSSYALVALR RDNAVASEAA MKYFVLGAMA SGFLLYGLSM
LYGATGSLDT NEVFKIIASG KVNHQVLVFG LVFIVAGLAF KVGAAPFHMW VPDVYQGAPT
AVTLLIGAAP ELAAFAIIIR LLVEGLLPLA IDWQQMLALL AIASLLVGNL AAIAQTNLKR
MLAYSTIAQM GFMLLGLVAG VVNGNTYNAQ FAYSASMFYI VTYVLTTLAS FGIILLLARE
GFESEEITDL AGLNQRSPLY AGVMAIAMFS LAGLPPLVGF YAKLAVLQAL IASGQALYIG
LAVFAVVMSL IGAFYYLRVV KVMYFDAPVT ASTVSAPRDV RTVLSINGLL ILVLGIVPGG
LMTLCAKAIV ATLAN
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