| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3492 |
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| Symbol | |
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| ID | 7972117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3682768 |
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| End bp | 3683304 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794076 |
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| Product | transcriptional regulator, MarR family |
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| Protein accession | YP_002945375 |
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| Protein GI | 239816465 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.198314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG CAGACAATCC GCAACTCCCG CCAGCCTCCG GCGACGCCGG GCGCCGGCCG
GTCGATTTCT ACCGTGCCGA GGACTACAAG GCCGAGGAAA GCATCGGGTA TTTGATGCGC
CGCATCCTCA GCGCGGTGGC CCAGGCGGTA GAAACCCGTA TGTGCGAGCC CGGTGGTCCC
ACTTTTCCGC AATGGTTGCC GCTGTACAAG CTGCATGTCG GCGCTGCCAC CACGGTGGCC
GAACTGGCCC GGGCCTGCGA GCTCGACGCG GGTGCCATGA CGCGCCTGCT CGACCGCCTC
GAGGCCAAGG GCCTGTGCCG CCGCGTGCGT TCGCTGGAAG ACCGGCGCGT GGTCAACATC
GAGCTCACCG AGGAAGGCCG CGCCGCCGCC CAGGAGGTGC CGTACGTGCT GAGCCGCGTG
CAGAACGAGC ACCTGGCGGG CTTCACCAAG GAGGAGTGGG AGCAGCTCAA GGGCTACCTG
CGCCGCATTC TCGACAACGC CCAGGCCCTG GCGGCCCGTG GAGATAAAAA TGACTGA
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| Protein sequence | MSDADNPQLP PASGDAGRRP VDFYRAEDYK AEESIGYLMR RILSAVAQAV ETRMCEPGGP
TFPQWLPLYK LHVGAATTVA ELARACELDA GAMTRLLDRL EAKGLCRRVR SLEDRRVVNI
ELTEEGRAAA QEVPYVLSRV QNEHLAGFTK EEWEQLKGYL RRILDNAQAL AARGDKND
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