| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3480 |
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| Symbol | |
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| ID | 7972591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3668581 |
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| End bp | 3669657 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794064 |
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| Product | secreted hydrolase-like protein |
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| Protein accession | YP_002945363 |
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| Protein GI | 239816453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5621] Predicted secreted hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCGG CCGCGTTCTT TCACAAGCTC TCGCGCCGCA GCCTGTTGCT CGCGGCGCTG
GCCGCCGCGC CCGCAAGTTG GGCGCTGCCC GCGCGCACGC TGCAGTTCCC GCGCGACTAC
GGCAGCCACC CTGATCTGCA GACCGAGTGG TGGTACATCA CGGGCCACGC GAAGACCGCG
GCGGGACGCG AGTTCGGCTT CCAGGTGACT TTCTTCCGCT CGCGCGTCGA TGCGGCAGAG
GGCCTGCGCT CGGCCTTCGC GGCCAGGAAC CTCGTGTTCG CGCATGCGGC CGTCACCGAC
CTCGAAGGCC GCGTGCTGCT GCACGACCAG CGCATTGCGC GCGTGGGCTT CGGCGTTGCA
TCGGCCAGCG AAACCGACAC CGATGTGCGA CTGCGCGACT GGTCGCTGGT GCGCAGGGAG
GACGGCAGCT ATTCGGCGCG CATCCCGGCC GGCGAGTTCT CGCTCGACCT GCGCTTCACG
CCCACGCAGC CGGTGTTGCT GCAGGGCAAG GCCGGGCTCT CGCGCAAGGG ACCGGACGAA
GCGCAGGCGA GCTACTACTA CAGCGAGCCC CAGCTGCGCA CGCAGGGCCG GCTCGCGCTC
GAGGGCCAGG CCTTCGACGT CGACGGCACC GCCTGGCTCG ACCACGAATG GAGCGAGGCG
CTGATGCATC CGGAGGCCGT GGGCTGGGAC TGGATCGGCA TGAACCTGGA CGACGGCAGC
GCCCTCACCG CCTTTCGCCT GCGGCGCCGC GACGGCAGTG CGCTATGGGC CGGCGGATCG
TTTCGCACGC GCGATGGCGC GCTGCGCGTT TTCAACAATG ACGAGGTGCG CTTCGACGGC
GCGGATACGT GGACCAGCCC GCACACGCAG GCGAAGTACC CGACCCGCTG GCGCGTGCAA
ACGCCCTCAG GCAGCTTCGA GGTGCGCGCG CTGCTCGACG ACCAGGAGCT CGACAGCCGC
GGCTCCACCG GCGGGGTGTA CTGGGAAGGC CTGAGCGACC TCGTCGATGC GCAAGGCCGC
CGTGTCGGCC GGGGCTACCT GGAGATGACC GGCTACGCCG CACCGCTGCG GCTCTGA
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| Protein sequence | MPPAAFFHKL SRRSLLLAAL AAAPASWALP ARTLQFPRDY GSHPDLQTEW WYITGHAKTA
AGREFGFQVT FFRSRVDAAE GLRSAFAARN LVFAHAAVTD LEGRVLLHDQ RIARVGFGVA
SASETDTDVR LRDWSLVRRE DGSYSARIPA GEFSLDLRFT PTQPVLLQGK AGLSRKGPDE
AQASYYYSEP QLRTQGRLAL EGQAFDVDGT AWLDHEWSEA LMHPEAVGWD WIGMNLDDGS
ALTAFRLRRR DGSALWAGGS FRTRDGALRV FNNDEVRFDG ADTWTSPHTQ AKYPTRWRVQ
TPSGSFEVRA LLDDQELDSR GSTGGVYWEG LSDLVDAQGR RVGRGYLEMT GYAAPLRL
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