| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3479 |
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| Symbol | |
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| ID | 7972590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3667505 |
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| End bp | 3668581 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794063 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_002945362 |
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| Protein GI | 239816452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAA CACCCTCCTC TTCCTCCTGC AGCGGCTGGC TCGGCGGCGC GATCCGCCGC
ATCGAGGCCG ACTACCAGCG CAGCGCCGAC ACGCACCTGA TCCCGCTGCC GCTGCCCGCG
CTCGCCGCGG CCGGCATCGA CCTGTACCTG AAGGACGAAT CGACCCATCC CACCGGCAGC
CTCAAGCACC GGCTCGCGCG TTCGCTCCTT CTCTATGCGC TGTGCAACGG ATGGGTGCGC
GAGGGCACCA CCATCGTCGA GGCCTCTAGC GGCTCGACGG CGGTCAGCGA GGCCTATTTC
GCGCGGCTGC TGGGCCTGCC CTTCATCGCG GTGATGCCGC GCAGCACCTC GCCCGAGAAG
GTGGCGCAGA TCGCCTTCTA CGGCGCGCGC TGCCACTTCG TCGACCATGC GGCGCAGGTC
TACGAGGAAG CGCACGCGCT CGCCGAGCAG ACCGGCGGCC ACTACATGGA CCAGTTCACG
TACGCCGAGC GCGCCACCGA CTGGCGCGGC AACAACAACA TCGCCGAAAG CATGTTCCAG
CAGATGGCGC GCGAGCGGCA TCCGGTGCCG GCGTGGATCG TGGTGGGCGC AGGCACCGGC
GGCACCAGCG CCACCATCGG GCGCTATCTG CGCTACCGCT GCCACGACAC CCAGGTGTGC
GTGCCTGATC CCGAGGGCTC GGTGTTCTCG GCCTACCACC GCAGCGGCGA CGCCACGCTG
ACCGCGGCGG GCTCGCGCAT CGAAGGGATC GGCCGGCCGC GCGTGGAGCC GAGCTTCATC
CGTTCGCTGG TCGACCGGAT GATCGAAGTG CCCAATCTCG ATTCGGTGGC CGCCATGCAC
GCGCTCTCGG CGCTGCTCGG CCGCAAGGTG GGCCCGTCGA CCGGCACCAA CTTCGTCGGC
ATGCTGGCCA TTGCCGGCGA GATGCGCGCG GCCGGCCGGC AGGGCTCCAT CCTTTCGCTG
CTGTGCGATG CGGGCGAGCG CTACCTGCCG AGCTATCACG ATGCCGCCTG GGTGCAGAAC
GCGTTCGGCG ACATCGGCCC GGCGCAGCAG CGCATCGACG CACTGGTTGC GGGGTGA
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| Protein sequence | MQQTPSSSSC SGWLGGAIRR IEADYQRSAD THLIPLPLPA LAAAGIDLYL KDESTHPTGS
LKHRLARSLL LYALCNGWVR EGTTIVEASS GSTAVSEAYF ARLLGLPFIA VMPRSTSPEK
VAQIAFYGAR CHFVDHAAQV YEEAHALAEQ TGGHYMDQFT YAERATDWRG NNNIAESMFQ
QMARERHPVP AWIVVGAGTG GTSATIGRYL RYRCHDTQVC VPDPEGSVFS AYHRSGDATL
TAAGSRIEGI GRPRVEPSFI RSLVDRMIEV PNLDSVAAMH ALSALLGRKV GPSTGTNFVG
MLAIAGEMRA AGRQGSILSL LCDAGERYLP SYHDAAWVQN AFGDIGPAQQ RIDALVAG
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