Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3467 |
Symbol | |
ID | 7972578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3651681 |
End bp | 3652679 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644794051 |
Product | hypothetical protein |
Protein accession | YP_002945350 |
Protein GI | 239816440 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.25166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCT GGTCCCTCCT TGCCTCCGTT CTTTCGCTGT GCGCCCTCCT GGCCGCCGGC TGCTCCACAT TCGACGAACA GCAGCGCGAG TGGATCTTCC AACCCAGCGA CCGCAGCTGG GGCAACACCG CGACCATGAC CGAGGGCATG CAGGACGTCT GGATCGACTT CCAGTCCTCC ATCACCGGCG AATCCGCCCG CCTTCACGGC CTCTGGCTCG GCGGCGAGCC CGAGACCACC GACCGTCCGG TCATGCTGTA CCTGCACGGC GCCCGCTACA ACGTGGCCGG ATCGGCGCCG CGCATCCAGC GCATGCACGA GCTCGGTTTC TCGGTGCTGG CCATCGACTA CCGCGGCTTC GGCAAGAGCT CCAAGGGCCT GCCCTCGGAA GAATCGGCGC GCGAGGACGC GCGCGCCGCC TGGACCTGGC TCGCAGCCCG GCATCCGCGG CAGCACCGCT ACATCTTCGG CCACTCGCTG GGCGGCGCCA TCGGCATCGA CCTGGCCGCC AGCGTCAACG ACGAGAGCGG CACCATCGTC GAAAGCACCT TCACCTCCAT TGCCGACGTG GTGAGCGGCT TCAAGTGGGG CTGGCTGCCG TTCGGCCCGT TCATCACGCA GCGCTTCGAG GCCATCAACC GCGTCAAGGA CATCGGCGCG CCGCTGCTGG TGGTGCATGG CACCGCCGAC AGCCTGATCA ACCCTACGCT GGGCCGCAAG CTCTACAACG CGGCCACCGT GCCCAAGCTC TTCGTGCTGG TGGAGGGTGG ATCGCACCAC AACACCAATT CGATCGGCGA GGCGCAGTAC CGCTCGGCGC TCTCGCAGCT GTTCCGCATG AAGCCCGAGA CCACGCTGGC TTCGCGGCAA GGGGAAGGCA CGCCGGTGCT GCGCGGCACG CCATCGCTGC CGGCCGCGCC GGCGTCCCCG CGCACCGATT CGCCCGCCCT GCCGCAGGAA GCGCGCGGCA AGGCCAGCGC CAGCGCGCAG GCGATCTGA
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Protein sequence | MKRWSLLASV LSLCALLAAG CSTFDEQQRE WIFQPSDRSW GNTATMTEGM QDVWIDFQSS ITGESARLHG LWLGGEPETT DRPVMLYLHG ARYNVAGSAP RIQRMHELGF SVLAIDYRGF GKSSKGLPSE ESAREDARAA WTWLAARHPR QHRYIFGHSL GGAIGIDLAA SVNDESGTIV ESTFTSIADV VSGFKWGWLP FGPFITQRFE AINRVKDIGA PLLVVHGTAD SLINPTLGRK LYNAATVPKL FVLVEGGSHH NTNSIGEAQY RSALSQLFRM KPETTLASRQ GEGTPVLRGT PSLPAAPASP RTDSPALPQE ARGKASASAQ AI
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